Paenibacillus sp. FSL R5-0912: R50912_25450
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Entry
R50912_25450 CDS
T03334
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq00470
D-Amino acid metabolism
paeq00550
Peptidoglycan biosynthesis
paeq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R50912_25450 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50912_25450 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paeq01011
]
R50912_25450 (murD)
Enzymes [BR:
paeq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
R50912_25450 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
paeq01011
]
Precursor biosynthesis
Amino acid ligase
R50912_25450 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
Pribosyltran
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AIQ42997
UniProt:
A0A089K3U3
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All DBs
Position
complement(5765373..5766794)
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AA seq
473 aa
AA seq
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MKHPDLYRGEEVVVLGLAKSGVQVAKVLHERGAVVTVNDKKERDQSPEASELESLGIYVI
CGGHPEGLIHEGVALVVKNPGIPYSVAPVQQALELGIEVVTEVEVAYHLCAAPMIGITGS
NGKTTTTTWVGRMLEAAGMSPIVAGNIGTPLCQAAQEADVDNWMVVELSSFQLKGTEAFR
PKVAALLNVAETHLDYHGGMEDYVASKSKLFANQGPGDTAVLNWDDPVCRELVPYIKAGI
LPFSMTEELVQGIFVRPSYLPETEDDLKRVIIYRDYTESETEIADVDSIGLPGRFNVENA
LAACGIAIAAGADPAVLGGVLASFRGVEHRLEYVTDKAGAAYYNNSKATNSKATAMALGS
FKKPVILVAGGLDRGSDYMELLPVLGGNVKALVALGETKDKLAVVAQLAGVKTIISVDNG
ESAAAVLQEAVREASALAEAGDVVLLSPACASWDMFTSYEERGRIFKEAVHNL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatccggatttgtaccgtggtgaagaagtggtcgtcctggggctcgccaaaagc
ggcgtccaggtggccaaggtgctgcatgagcgcggcgcggttgtgacggtcaatgataaa
aaggaaagagatcaaagtcccgaagcttccgaactggaatctttgggaatttatgttata
tgcggcgggcatccggaggggctgattcatgagggtgttgcacttgttgtcaagaatccg
gggattccctattccgtggctccggtgcagcaggctcttgagcttggcatcgaagtcgta
acggaggtagaggtggcttaccatctctgcgccgcacctatgatcggtattacgggctcc
aacgggaagacgactacaacgacctgggttggccgtatgctggaggcagcggggatgagt
cctatagttgccgggaacatcggtacgccgctctgtcaggccgctcaggaggctgacgtg
gacaactggatggttgtcgagctcagcagcttccagctcaaggggacggaggccttccgg
cccaaggtcgctgccctgttgaatgttgccgagacccatctggattatcatggggggatg
gaggattatgtggcctccaaatccaagctgttcgcgaatcaggggccgggcgacactgct
gtactgaattgggatgatccggtctgccgcgagctggttccttatatcaaagcaggcatc
ctgcccttctccatgaccgaagagctggttcagggcatctttgtccgtccatcctatctg
ccggagacagaagatgatctgaagcgggtcatcatctaccgggattatacggagagcgag
actgaaatagccgatgtggattcgattggccttccgggccgcttcaatgtggagaatgcg
ctggccgcctgcggcattgccattgccgcaggcgcggacccggctgtgcttggcggagtg
ctggcttccttccgcggtgtggagcaccggctggaatatgtgacagacaaggcgggggcc
gcctactataacaattctaaggctaccaattccaaagctacagccatggcgctggggtcc
ttcaagaagccggtcatcctcgttgccggaggtctggaccgcggttctgattatatggag
ctgctgcctgtcctcggagggaacgtcaaggccctggtggcccttggggagacgaaggac
aagctggccgtggttgcgcagctggcaggagtaaagacaatcatctccgtcgataatggg
gagagcgccgccgccgtgctgcaagaggccgtgcgggaggcttccgctcttgcggaagca
ggagatgtagttctcctctctcctgcctgtgccagctgggatatgtttacatcctatgag
gagcgcgggcgtatttttaaagaggcggtgcataacctttaa
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