Paenibacillus sp. FSL R5-0912: R50912_25475
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Entry
R50912_25475 CDS
T03334
Name
(GenBank) stage V sporulation protein D
KO
K08724
penicillin-binding protein 2B
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq00550
Peptidoglycan biosynthesis
paeq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50912_25475
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paeq01011
]
R50912_25475
Peptidoglycan biosynthesis and degradation proteins [BR:
paeq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R50912_25475
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
TrkA_C
Motif
Other DBs
NCBI-ProteinID:
AIQ43002
UniProt:
A0A089K3U8
LinkDB
All DBs
Position
complement(5772731..5774971)
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AA seq
746 aa
AA seq
DB search
MVKRIKLRTLFIGGCITLFFLVLVGRVFWIQVMQSEKWQKEAATQWAHTSTIKAVRGVIE
DRNGSVLASDVPAYTVVVDPEVIAEKGIGQEVIQGLHELLGKPVDQLKKLVEAKDDKGNY
YKNREIRNEGWKINQELADKVTAFVDKLKKEHDTLETGVGLVREQKRYYPKDSLAAHILG
YTDRDGNAVMGLEKYFDKQLSGTDGKLNYQSDGKGIKLPDSQDSYQPVVNGSNYKLTIDS
TIQHYIEEAMKKAYAEYKPKSISVIAADPNTMEILGLANMPTFNPNEYYDLNQDAAGFYN
HAIMSRFEPGSTFKIVPLAGAVQEKLFNPEETVHSGSIRIKGYSKPIYDMNRAGYGDITL
LQGVKRSSNVAFVKIGYELLGQEKLLKYIKDFGFTEKTGIDLPGETTGIVNPNPNRPIEN
ATLAYGHGKLLVTPIQQLTAMAAIANGGKLMVPHVVKEVTDPNTGKTTVTQPEVVRQVIS
EESARETGSYLEQVVADQVIGTGRHAYIEGYRVAGKTGTAIKPDGKGGYDRDKVLASFLG
YAPANNPKIAVFVVIDEPADAAGGGAAAGPIFKEIVSQSLQYMGVPKTVESDNAVGSKTS
VKLAADSSELRSTPDLVNKTVKESRQLLLNQGFDFEIVGTGAKVISQYPDKSTKLAAGQR
IYLLTQQDEAMTIPDLKGESLRDALEILNLLKVGITVEGEGYVTEQTQTKNNSKTHISLK
LSPLNEYGENIPVAVNVDPDAEETAE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaagaataaaacttcgcacgctgtttataggagggtgtattaccctctttttt
cttgttttagtcggcagagttttctggattcaggtaatgcagagtgagaagtggcagaag
gaagcagctacgcagtgggcacatacttcaaccatcaaggcggtccgcggcgtgattgaa
gaccgtaacggcagtgttctggccagtgacgttcctgcctataccgttgtggttgacccc
gaggtcattgcggagaaggggatcggccaagaggtcatccagggactgcatgaactgctt
ggcaagcctgtagatcagttgaagaagctggtagaggccaaagacgataagggcaattac
tacaagaaccgggagatccgcaacgaaggctggaagattaatcaggagctggccgataag
gttacggcttttgtggacaaactcaagaaagagcatgataccctggaaacgggcgtaggc
ctcgtgagagagcagaagcgttattatccgaaggattcgctggctgcgcatattctgggc
tacaccgacagggacggcaatgcggtcatgggtctggaaaagtacttcgacaaacagctc
tccggtacggatggcaagctgaattatcagagtgacggcaagggaatcaagctgcccgat
tcacaggatagctaccagcctgtagtgaacggaagcaattacaagctgaccatcgacagc
accattcagcattatatcgaagaggcgatgaagaaggcttatgccgagtacaaaccgaag
tcgataagcgtcattgctgccgatccgaatacgatggaaattctgggactggcaaatatg
ccgaccttcaatccaaatgaatattatgaccttaatcaggatgcggctggcttctataac
cacgcgatcatgtcgaggtttgagccgggctccacgttcaagattgtaccgctggccgga
gccgttcaggagaagctgtttaatccggaagagaccgtccattcgggctctatccggatc
aaagggtacagcaaaccgatctatgatatgaatagagccggttatggagatatcaccctg
cttcaaggggttaaacgttcaagtaacgtagcctttgtcaagattggctatgagctgctg
ggccaggaaaagctgctgaaatatatcaaggatttcggctttacggaaaagacgggtatt
gacctcccgggcgaaaccaccggtattgtcaacccgaatccgaacaggccgatagagaat
gctaccttggcctatggccatggcaagctgctggttacaccgattcagcagctcacggcg
atggctgcgattgcgaacggcggcaagctgatggtaccgcatgtagtgaaggaagttacc
gatcctaatacaggcaagactacggtgactcagccggaggttgtacggcaggtgatttca
gaggaaagcgcccgcgaaaccggcagctacctcgagcaggtcgtggcagaccaggtaatc
ggaaccggacggcatgcctatatcgaagggtaccgcgtagccggcaagaccgggacggcg
attaagcctgacggcaagggcgggtatgaccgggataaagtactagcatccttcctcggt
tacgctccggccaataatccgaagatcgcggtattcgtcgtaattgatgagcctgcggat
gctgccggcgggggagccgcagcgggacctattttcaaagagattgtctcgcagtccctg
caatatatgggcgtacccaaaacagttgaatcagataacgcagtgggaagcaaaacgtca
gtcaagctggcggcagactcctcagagctgcgcagtacacctgatctcgtgaacaaaacg
gttaaggaatccagacagctgctccttaatcaaggctttgacttcgagattgtcggtaca
ggggcaaaggtaatcagccaatatccggataagagcacaaaacttgccgccggacagcgg
atttatctgcttacccaacaggatgaagcaatgaccattcccgatttgaagggagaatct
ttgcgcgatgctctggaaattctcaatctgctcaaagtagggattacggttgagggcgaa
ggttatgtcacagagcagacgcagaccaagaataacagcaaaacgcatatttctctgaag
ctcagtcccctgaatgaatacggggagaatatccctgtggccgtcaacgttgaccccgat
gcagaggagactgcggagtag
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