Paenibacillus sp. FSL R5-0912: R50912_25790
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Entry
R50912_25790 CDS
T03334
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_25790
Enzymes [BR:
paeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50912_25790
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
R50912_25790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_30
AAA_16
ResIII
AAA_22
DUF5302
Motif
Other DBs
NCBI-ProteinID:
AIQ43063
LinkDB
All DBs
Position
complement(5844125..5848315)
Genome browser
AA seq
1396 aa
AA seq
DB search
MSIHPVTEAKPEGSLWSDDQWRAIAESGSDILVAAAAGSGKTAVLVERIIRKISNEEAGF
SVDRLLVATFTKAAASEMRQRIREALERKLEEDTSGENEYLRRQLALLGRASITTLHSFC
LEVIRRYYQLIPIDPGFRILNEHEAEMMRQELLEELMEEKYGEVTEDGDDSVFVRLVDWF
SGERSDDAVHSLIQRLHDFARSHPWPAQWLRDTAADFSLPDAEALSHTPWVQSILAEARL
TLDGAISQLLQAREIALQPGGPAPYADNLTADLDMAQGLRDAVESQPWADLYDIFMEISF
GKLKPCKKDSTDPGLQESVKATRDQVKKSLLELQKSLFGRPAESFLGELHEAAPLMHELA
ETVIGFGERYRLEKAGRGLVDFSDLEHYCLQILRHPDSHPGHSLPSDAAMEYRSQFDEVL
LDEYQDTNSVQEEIVRLISREFPGNRFMVGDMKQSIYRFRLAEPGLFLDKYRRFNAGPSA
EGNGSSLLAGEADARTEASPGQSYNAGGSVIDLARNFRSRLEVVNAVNMIFRQIMDSNVA
EISYDERAELVYGANFPGTAEKGPDTYFAPELLLIDKGTSASGQPEEAGEDDELPQQENE
AVESETAQLEARAIARRISQMTGMTGGEPLMIYDKALRIMRPVVYGDIVILLRSARVWTP
LMIEELRNEGIPAYGDQNKGYFQATEVEIALSLLQIVDNPRQDIPLAGVLRSPVVNLREE
ELAKVRLCSTGTFYDALVAASEAADIPGDNPPAMGSAGAALRVEQAGDAGGDLTAETAAA
YDLVTTSEQETLLEDRAAETEASAALTAIHPQLRMKLKTFRDMLEDWRNAARQGSLSELI
WRIYRESGYLEWVGGLPGGFQRQNNLKALYDRAVQFENETSARGLFRFLVFISRLRENGG
DLGVAGGSSEEAGGVRIMTIHKSKGLEFPVVFLAGMAKMFNRQDLHSPFLMHKELGFGPR
FVERETRVSYPTLPYLAINRRSRLELLAEEMRVLYVGLTRPRDKMILVGTVRDLPRTVSG
WTAMQGREELLLADHLLARGRSYLDWVGPALIRHPAAAILRKVAGSEGTVSTVLHGDESN
WSISVLGAAELGSGAFLAADGDSDKNEERRMALEALRRGRTVPSLGTASAGEIADRLQWT
YPYAAASGIPAKTSVTELKALLSMQEQPSLDLLEDTYIHGEQNARSGGVGYGDSLHLQRP
KFMEKRGLTSAERGTAYHTVMQHIPLDEPVDRSVLEATLARLERLAILSKEQADAVELGE
VEDFCTSELGRRLFKSSWKTREQPFSYSVPADEAYQGLAYLDEAAAGLPADGASGAFNET
VLIQGVIDCLFREEGRLILLDYKTDFVPVQEGGLETLTEKYRFQLELYSKALLDILGEPV
SEVWLYFFDGGHAVRL
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatacatcctgtaacggaagcgaagccggaagggagtctgtggagtgacgaccag
tggcgcgccattgccgagagcggcagcgatattctcgtcgcggcagcagcaggttccggt
aaaacagctgtactcgtagagcgcattatccgcaaaatcagcaatgaggaagcaggcttc
agcgtggaccggctgctggtagcgaccttcaccaaggctgcagcctccgagatgcggcag
cggatccgggaggcgctggagcgcaagctggaagaggacacaagcggtgagaacgaatat
ctgcgccgccagcttgctctgctgggcagagcctctattactacgctgcattccttctgt
cttgaagtgatccgccggtattatcagctgattccgattgatccgggcttccgtatactc
aatgagcatgaggcggaaatgatgcgccaggagctgctggaagagctgatggaggagaaa
tacggtgaggtcactgaagacggggacgatagcgtatttgtccggcttgtggactggttc
agcggtgagcgcagtgatgatgcggtgcattcgctgattcagcggctgcatgatttcgcg
cgcagccatccctggccggcgcagtggctgcgggataccgctgccgacttctctttgccg
gatgcggaggccttgagccatacgccatgggtgcagagcattcttgccgaagccaggctg
acgctggatggtgccattagccagctgctgcaggcccgcgagatcgcgcttcaacccggc
ggaccggctccttatgcggataacctgacggccgatctggatatggcacaggggttacgg
gatgcggtagaatcgcagccatgggctgatctctatgatattttcatggaaatctctttc
ggcaagctgaagccctgcaagaaggattccactgatcccggcctgcaggagagtgttaag
gcaacccgtgatcaagtgaagaagagcttgctggagttgcagaaatccttattcgggcgc
ccggcggaatctttcctgggtgaactccatgaagcggcaccgctgatgcacgagctggcg
gagacggttatcgggttcggtgaacgttaccggctggagaaggcgggccgggggctggtg
gatttcagtgatctggagcattactgcctgcagatcctgcgccatccggactcgcatccg
ggacattccctgccctcggatgcggcgatggaataccgcagccagttcgatgaggtgctg
ctggatgaatatcaggataccaacagcgtacaggaggagatcgtccggctgatctcccgt
gagttccccggcaaccgcttcatggtcggggatatgaagcagagtatctaccgcttccgc
ctggctgaaccggggttgttcctggacaaataccgcaggttcaacgctgggccgtctgct
gaaggtaacggcagtagcctgcttgccggtgaagcggatgcccggactgaagcaagtccc
gggcagagctataatgccggcggctcagtcatcgatctggcccgcaatttccgcagccgg
ctggaagtcgtgaatgccgtaaatatgattttccggcagatcatggacagcaatgttgcg
gagataagctatgacgagcgtgcagagctggtctatggagccaacttcccgggaacggcg
gagaaagggccggatacttattttgcgccggagctgctgctgatcgataaggggacctct
gcatccggacagcccgaggaagccggggaggacgatgagctgccccagcaggagaatgag
gcagtagagagtgagactgcacagctggaagcacgggccattgcccggcgcatctcgcag
atgacaggaatgaccggtggggaaccgctgatgatctatgataaggcgctgcgcatcatg
cgtccggtagtatacggcgatatcgttattctgctgcgttccgcccgtgtgtggacgccg
ctgatgattgaagagctgcggaatgaaggcattccagcatacggcgaccagaacaagggg
tacttccaggctaccgaggtggagatcgccctttcgctgctgcagattgtcgataatccc
cgccaggatattccgctggccggtgtactgcgctcgccggtggtgaatctgcgcgaggag
gaactggctaaggtgcgcctatgcagcaccggaacgttctatgatgcgctggttgcggca
tcagaagctgcggatataccgggggacaatcctccggcgatgggttcagcgggtgctgcc
ctgcgggtggagcaagcaggcgatgcaggcggtgatttaacggcagagactgctgcagcg
tatgatcttgtcacaacatcagagcaagagactctgcttgaagacagggctgccgagaca
gaagcctctgcagcgctgacggctattcatccgcagctacggatgaagctgaagaccttc
cgggacatgctggaggactggagaaacgccgcccggcagggaagcttaagcgaactaatc
tggcgtatttatcgggaaagcggatatctggaatgggttggcggacttcccggcggattt
cagcgccagaacaatttgaaggcattgtatgaccgggctgttcagttcgagaatgagacc
tcagccagaggattgttccgcttccttgtgtttatctcacggctgagagagaacggcggg
gatctgggcgttgccgggggcagcagcgaggaggctggcggcgtccggattatgacgatc
cacaagtccaagggtctggagttcccggttgtattcctggcaggcatggccaaaatgttc
aaccggcaggatctgcattccccgttcctgatgcataaggaactcggcttcggcccccgc
ttcgtggagagggagacacgggtcagctacccgacgctgccatacctggccattaaccgc
cgttcacggctggagctgctggctgaggagatgcgcgtgctctatgtcggactgacccgt
ccgcgcgacaaaatgatcctggtaggcacggtccgcgatttgccgcgcacagtatctggc
tggactgctatgcaaggccgggaggagctgctcctggcagaccatctgctggcccggggc
cgcagctatctggactgggtgggaccggcgctgatccgccatcccgcagcagctattctg
cgcaaggttgcgggaagtgagggcacggtgtctacggtacttcacggcgatgagtccaac
tggagcatttcggtgctcggcgctgcggagcttggctccggagcttttctggcagcagac
ggtgacagtgacaagaatgaagaacgccgtatggcgcttgaggcgctccgccggggcagg
actgtgccttcgctgggaactgcctcagcaggggagattgcagacaggctgcagtggacc
tatccgtatgcggctgcttcaggcattcccgccaaaacatcagtgaccgagctgaaggca
ctgctgtccatgcaggaacagccctcccttgatctgctggaagatacctatattcatggg
gagcagaacgcaagaagcggcggtgtcggatatggtgacagcctgcatctgcagcgcccg
aaatttatggaaaagcggggacttacctctgctgagcgcggaaccgcgtatcataccgtt
atgcagcatattccgctggatgagccggtggaccggtctgttctcgaggccacgcttgca
cgacttgaacggcttgccatactcagcaaggagcaggcagacgcggttgaactgggcgaa
gtagaggatttctgtactagtgaactgggccgcagactctttaagtcttcctggaagacc
agagagcagcctttcagttatagcgttcctgcagacgaggcttaccagggacttgcatac
ctggacgaagcggcagcgggactcccggctgacggcgccagcggagccttcaatgagacc
gttctgattcaaggggtaatcgactgtctgttccgtgaggaagggcgcctgattctgctt
gattacaaaacagatttcgtcccggtgcaagagggagggctcgaaacgctgactgagaaa
taccgcttccagctggagctgtacagcaaggcgctgcttgatattctgggcgagccggtc
agcgaggtctggttgtactttttcgatggcggacatgctgtgaggctgtga
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integrated database retrieval system
