Paenibacillus sp. FSL R5-0912: R50912_25795
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Entry
R50912_25795 CDS
T03334
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_25795
Enzymes [BR:
paeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50912_25795
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
R50912_25795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AIQ43064
UniProt:
A0A089LE50
LinkDB
All DBs
Position
complement(5848312..5851848)
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AA seq
1178 aa
AA seq
DB search
MTVNFLIGRSGSGKTTTIWETVSSRLKTEPLGAPIIILVPEQGSFGAERGLLAAGNVKGS
IRAQTLSFSRLAYRVKQETGGSASLPISEEGKKMLIYKIVNRRKEELKLFGASSDRPGFV
ERLSDLHTELKRCCLGAGDLEEQLGRMRDALGGSPILAGKLEDLHLVFSELEQEMSQLYM
DQEDRLAELAEHIQDSGYIRGSEIWVDGFHGFTNQEFIVLRELMQYASGVNIALTLDRIY
PSGQAPHELELFHPAAVTYIKLRGMAEEMGLTVWDQLLAPPVLPRFKDSPALAHLERGFQ
RRLRWNGAAGQVEEAVSIRAAASRRTEVEGVLREMLSLARDSGAKYGEMAVFMRNMTDYG
PLIAPLFQDFGIPFFLDQKLNELHHPLVEFIRSALDVVRRRWRYEDVFRCVKTELLLPLD
GSITRANMDELENYVLACGIHGYRWTDGRSWKGIPRLSLEGSEAVDEAMLARMEACRSAI
TGPLQAFEQRVKSSRSGLELCRAVYLLLEDTEAARKLERMGAESLEQGRPEAAREHNQLW
GAVLDLLDQIAEMMGREKMEFELFSGVLETGLAELKMGLVPPALDQVLVGTMDRTRVSGV
KYAFLLGFNEGVVPAQFKEDGILSEGERLLLENAGMELAPGSSRKLLDERFLIYNALTTA
SRKLWISYATADDEGKALLPSEIIRQLQGMFPEGLDEKYLSGFPQGGEAADECASAEAVH
MKFIGHPEQTLRMLMLQLRQWRQGVEIPRLWWDVYNWFAADEQEEVSMKLQLERLLGSLF
YRNEGIRLKRETSLRLYGGSTLRGSVSRMEKFVACSFSHFASYGLRLKERQLYKLQAPDI
GQLFHAALSQMAQRLQKEGRSWGSMTAEECRREAGETVDRLSPLLQGEILMSSKRYSYIS
RKLKNIVGRASVILGEHSRRGSFEPIGLELDFGPGKDLPPLRITLPNGCVMEVVGRIDRV
DMAEGEQGILLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLTYSEQWLGQAALPAGA
LYFHVHDPLLTSANGMNREQAEQELMKRFKMKGLLTADREVVSLMDTTLDKGYSSIVPVA
LKSDGSFYSSASVATPEQWGQLLSSVRSTISDIGTRITEGDVAIQPYRIQQETACTFCSF
RPVCQFDEAVEGNGYNNLSKPGKEVIWDLLSRKGGEKL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaactttttgatcggacgctcgggcagcggcaagacaactacaatatgggag
acggtatcctcacggctgaagacagagccgcttggagcgccgataattatacttgtccct
gaacagggatcattcggtgcggagcgcggtctgttggctgcgggcaacgtgaagggcagc
atccgcgcccagacactcagcttctcgcggctggcctaccgggtgaagcaggagaccggc
ggcagcgcgagtctgccgatcagcgaggaaggcaagaagatgctgatctataagatcgtc
aaccggcgcaaggaggaactgaagctgttcggcgcctcctcggaccggccaggattcgtg
gaacggctcagcgacctgcacacggagctcaagcgctgctgccttggagcaggtgacctc
gaagaacagctcggcagaatgcgggatgccctgggaggaagtccgattctggccggcaag
ctggaagatctgcacctggtcttcagtgagctggagcaggaaatgtcacagctctacatg
gatcaggaggacaggctggctgagctggctgagcatattcaggattccggctatatccgg
ggatccgagatatgggtagacgggttccacgggtttaccaatcaggaattcatcgtattg
cgtgagcttatgcaatatgcctcgggggtcaacattgccctgacgctggaccggatctat
ccttcgggccaggcaccgcatgagctggagctgtttcacccggctgcggttacgtatatc
aagctgcggggaatggctgaggagatgggccttacagtctgggaccagcttctggccccg
cctgtacttccaaggttcaaggacagtccggctctcgcccatctggagcgcggattccag
cgccggctgcgctggaacggagcagccgggcaagtggaggaggcagtcagtatccgggct
gcggcctcccgccggaccgaggttgaaggcgtgctgcgcgagatgctgagcctggccaga
gattcaggggccaagtatggtgagatggctgtattcatgcggaatatgacggattatggg
ccgctgattgctccgctgttccaggacttcggcattcccttcttcctggaccagaagctg
aatgagctgcatcatccgctggtggaattcatccgttccgctctggatgtagtccgccgc
cgctggcgctatgaggatgtgttccgctgcgtgaagaccgagctgctgcttccgctggac
ggaagtattacgcgcgccaatatggatgaactggagaattatgtgctggcctgcggtatt
cacgggtaccggtggactgacggccgttcctggaaaggcattccccgtctctcgctggag
ggcagtgaggccgtagatgaagccatgctggccagaatggaagcctgccggagcgcgatc
acaggaccgctgcaggcttttgagcagagggtcaaatcaagccgcagcggcctggagctg
tgcagagcagtatatctgctgcttgaggacacagaggcagcgcgtaagctggaacggatg
ggggcggagtctctggaacagggacgcccggaagctgcccgtgagcataaccagctgtgg
ggtgctgtgctggacctgctcgatcagattgccgagatgatgggcagggaaaaaatggaa
tttgaactgttctccggcgtgctggaaacagggctggctgagctcaagatggggctagtc
ccgcctgcccttgatcaggtgctggtgggaacgatggaccgtacgcgggtgtctggagtg
aagtatgccttcctgctgggcttcaatgaaggtgtggttccggcacagttcaaggaagac
gggatcttgtccgagggagagcgtctgctgctggagaatgccggtatggagctcgccccc
ggttcatcccgcaagctgctggatgagcgcttcctgatctacaatgcgcttacaactgcc
agcaggaaactgtggattagttacgcaacggctgatgatgaaggcaaagcgctgctgccc
tcggagattatccgccagctgcagggcatgttccctgaagggctggatgagaagtatctg
tcagggttcccccagggaggggaggcagctgatgaatgcgcgtctgcggaagcggtccac
atgaaatttatcggccatcctgagcaaaccctccgcatgctgatgcttcagctccggcag
tggcgccagggggtggagattccccgcctgtggtgggatgtctataactggtttgcggcc
gatgagcaggaggaagtctcaatgaagctgcagcttgaacggctgctgggctcgctgttc
taccgcaacgaagggatcaggctgaagcgggagaccagtctgcggctgtatggcggctcc
acactgcgcggcagcgtgtcgcgcatggagaaatttgtcgcctgctccttctctcatttc
gcttcttacgggctaaggctgaaggaacgccagctctataagctccaggccccggatatc
gggcagctgttccatgcggctctaagccaaatggcgcagcggctgcagaaggagggccgc
agctggggcagtatgacggccgaagaatgccgccgtgaggcgggcgagacggtagaccgt
ctgtccccgctgctgcagggcgaaattctgatgagcagcaagcgttacagctatatctca
cgcaagctgaagaatattgtcggccgcgcttcagtgatcctcggcgagcattcgcgcagg
gggagcttcgagccaatcgggctggagctggattttggcccgggaaaggatctgcctcca
ctgagaattacactgccgaatggctgcgtaatggaggtggtcggccggattgaccgtgtg
gatatggctgaaggcgagcagggtatacttctgcgggtcatcgactacaaatcaagccag
aaggatctcaagctgcatgaggtctactatggattgtcgctgcaaatgctgacctatctt
gatgtgctgctcacctattccgagcaatggcttggtcaggctgcactcccggcaggcgcg
ctctatttccatgttcatgatccgctgctgacctcggccaacgggatgaaccgggagcag
gcggagcaggaactgatgaagcgcttcaagatgaagggtctgctgacggcagaccgtgaa
gtggtctcactgatggataccacactcgacaaagggtattcctcaattgttccggtagcg
ctaaagagcgacggcagcttttacagcagcgcgtctgtagctacccccgagcaatggggt
cagctgctgtcttcagtgcgcagcacgatttcggatatcggtacgcgtattacggaaggc
gatgtggccattcagccttaccgcatccagcaggagaccgcctgtaccttctgctccttc
cgcccggtctgccagttcgacgaggctgtggagggcaatggctacaataatctgagtaag
cctggcaaagaagtaatctgggatctgctgtcccgcaaaggaggagagaaattgtga
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