Paenibacillus sp. FSL R5-0912: R50912_31050
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Entry
R50912_31050 CDS
T03334
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03420
Nucleotide excision repair
paeq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R50912_31050
03430 Mismatch repair
R50912_31050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_31050
Enzymes [BR:
paeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50912_31050
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50912_31050
MMR (mismatch excision repair)
Other MMR factors
R50912_31050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AIQ43935
UniProt:
A0A089K845
LinkDB
All DBs
Position
complement(7038118..7040475)
Genome browser
AA seq
785 aa
AA seq
DB search
MQLVNIQDAVSRLNPPQRQAVESTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAI
LAITFTNKAAREMQDRVSKLVGTEGRDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNCMKDLDIDTKKFEPKAIQAVISTNKNELITPAQYEQKIGDYFEGLVAKVYTK
YQQRLRSNNSLDFDDLIMKTIQLFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRML
AEGHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEAKTIMLEQNYRSTSNILNAANGV
IALNTGRKPKKLWTDSDEGAKIKVFRGDSEHDEGYFVTGEISKNVKQGQAYQNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKR
GLGDTTVGKLAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSV
TELTEKILELSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLAL
IADIDSVNDEEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERR
LAYVGITRAEKQLFLSCARMRTLFGRTTANAPSRFLEEIPEELKEDTVKESDRFRRGGAE
VGGAYGGRGFGGGSRGNFGSRTAAAGNAPAGGGAASFGSGSSASAVPGAGRVVVTTGGAQ
SAPGAGAAASAGFKAGDKVSHGKWGIGTVVAVKGSGNDTELQIAFPAPVGVKRLLAGFAP
ITKVE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgttaacatacaagacgccgtaagccggctaaatcctccgcagcgtcaggct
gtagaatctaccgaaggtcctctgttgatcatggccggagcgggcagcggtaagacccgc
gtgctgacccaccggatcgcctggctgattgcgaaccgcaaggcaccgccttgggcgatt
ctggcgattacttttacaaataaggccgcccgggagatgcaggatcgtgtctctaagctg
gtagggacggagggccgggatatttgggtatccaccttccactcgatgtgtgtgcggatc
ctgcggaaggatattgagcggatcggcttcacttcgaacttctccattctggattcgacg
gaccagttatccgttatccgcaattgtatgaaggatctggacattgataccaagaagttc
gagccgaaggccattcaggctgtgatcagtacaaacaagaatgagctgattacaccggcg
cagtatgaacagaagatcggcgattattttgaaggccttgtggccaaagtgtataccaag
taccagcaacggctgagaagcaataactcgctggatttcgatgacctcatcatgaagacg
atccaattgttcaaggaagttcctgaggtattggatttctaccagaagaagttcaaatac
attcatgtcgatgagtatcaggatacgaaccgggcgcagtatatgctctgccggatgctg
gccgagggtcatcaccggatctgcgttgtcggggacagtgaccagtcgatctaccgctgg
cgcggggcggatatttcgaacatccttaatttcgaagaagactatccggaagccaaaacc
attatgctggagcagaattaccgctcaacctccaatattctgaacgcagccaatggtgtt
atcgcactgaataccggacgcaagccgaagaagctgtggaccgattcggacgaaggcgcg
aagatcaaggtgttccgcggagactccgagcatgatgaaggatacttcgtcaccggagag
atcagcaagaatgtgaagcagggccaggcgtaccagaatcatgcgattctataccgtacg
aacgcccagtcccgtgtaatagaagaaattctgatcaaatcggatattccttatcagatc
gtcggcgggatcaagttctatgaccgcaaagaaatcaaggatctgctggcgtatctgcgc
ctgctctccaatcctgatgatgatatcagcctgacgcggattatcaatgttcctaagcgt
ggcctcggggatacgactgtcggtaaattggcggcagcagcggcttcccagggagtatcg
atcttccgggcactgcagacggtggatgatctgggctttgccggccggacgcgtaatacg
ctggtagagttctatgatatgatcgaagccctgcaccggatggtggaattcctctcggta
acggagctgacagagaagattcttgaactgtcccagtaccgactggagctgcagaatgag
aatactcttgaatcccgttcccgtctggagaatatcgatgaattcctgtccgtaacgatg
gaattcgagaagaacaacgaggataagtcgctggtctccttcctgacggatctggcgctg
atcgctgacattgacagcgtgaatgacgaagaagagcgcagcgatgctgtcgtgctgatg
acgatgcacagcgcgaaggggctggagttcccgaccgtcttcattattgggatggaagag
ggcgtgttcccgcacagccgtgctttccaggacaatgatgaactggaagaggagcgccgg
ctggcgtatgtgggcattacccgtgcggagaagcagctgttcctcagctgtgcacggatg
cgcacgctgttcgggcggacgaccgcgaatgcgccgtcccgcttcctggaggagattccg
gaggagctgaaggaagacaccgttaaggaatcagaccgcttccggcgcggaggcgcagag
gttggcggtgcttacggcggccgcggcttcggcggaggcagccgcgggaacttcggcagc
cgcaccgctgctgccgggaatgcgccggcaggcggcggtgccgccagcttcggcagcggc
agctcggcgagcgcggtgcccggcgcgggccgcgtagtggtgacgaccggaggcgcgcag
agcgctccgggagcaggggccgcagcgtccgccggcttcaaggcgggagacaaggtctcc
cacggcaaatggggcataggcaccgttgtggccgtgaagggcagcggcaacgatacggag
ctgcagattgccttcccggcgccggtgggcgtgaagcggctgctggccggttttgcaccg
atcaccaaagttgaataa
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