Paenibacillus sp. FSL R5-0912: R50912_32145
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Entry
R50912_32145 CDS
T03334
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03022
Basal transcription factors
paeq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
R50912_32145
09124 Replication and repair
03420 Nucleotide excision repair
R50912_32145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paeq03021
]
R50912_32145
03036 Chromosome and associated proteins [BR:
paeq03036
]
R50912_32145
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_32145
Enzymes [BR:
paeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
R50912_32145
Transcription machinery [BR:
paeq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
R50912_32145
Chromosome and associated proteins [BR:
paeq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
R50912_32145
DNA repair and recombination proteins [BR:
paeq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
R50912_32145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIQ44130
LinkDB
All DBs
Position
complement(7293943..7296252)
Genome browser
AA seq
769 aa
AA seq
DB search
MSYAEIALSVRALVEYAFSSGSLEPGFRSGTAMVEGTRSHQLIQKQYKEADRKEVYLKTE
IPHGDLLFIIDGRCDGLLAAGDGSLTVEEIKSIAGTPDSALEGREVHWAQAFMYAYILTQ
DLDLQAIQVKLTYVQRGSEEQYSLYREMTREELTAFAEETVAKYAPYAEMMVRYKAKRGE
SIHSLSFPFSGYRPGQRHFAAAVYTSIAEGANLFAQAPTGIGKTMSTLFPAVKALGEDKV
SGIFYLTAKTVTRIAAQEAVMMLNSRGLHLHVITLTAKEKACFREDGSCGADSCPFAEGY
YDRINAAMLDMLEHEMLMTREIIAAYARKHEVCPFEFSLDAAYACDIVICDYNYIYDPRI
SLKRLSEERKKKTVLLVDEAHNLVDRGREMYSASLTKAPFLALQRQYKTVNPRLSSAARA
VNAFFIALRKSCGDKGAGEWKEYHAELPELLELFASEAELELLHSSSLITPPAEGEAGSL
LDTYYAVQGMLRTFKTYDERYMTYAEVRSGDVYLKLFNLDPSHLLQQMGGSFRSQILFSA
TLSPLSYYRDMIGADEEDYSLSLSSPFHKEQWQVSVLPVSTRYHDRDASLQPLSDALKGM
VSRKGNYLVFFPSYLYLKNVYEVFTEKYPEVATLLQGSGMSETERENFLAAFRPDNPDTL
LGFAVLGGIFSEGVDLPGDRLNGVMVVGVGLPQVGLERNLLRSYFQAQGKNGFDYAYVYP
GMCKVQQAGGRLIRSENDSGIIVLADDRFLQSSYRQLLPEEWRDYFVMA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcagaaatcgcgttgtccgtgagggcactggtggaatatgccttcagcagc
ggcagtctggagccgggattccgcagcggtacggctatggtggagggtacgcgcagccat
cagctgattcagaagcaatataaggaagcggaccgcaaagaggtatatttaaaaacggag
attccgcatggggatctgctgttcatcatcgacgggcgttgcgacggcctgcttgcagcc
ggggacggcagcctgactgtggaggagatcaaatccatcgccggaacgccggattccgcc
ttggaaggacgggaggtacactgggcacaggctttcatgtatgcctatatcctcacgcag
gatctggatctccaggcaatacaggttaagttaacctatgtgcagcggggaagtgaggag
cagtacagcctatacagggaaatgacccgcgaagagctgacagcctttgctgaagagacg
gtagccaagtatgcgccatatgctgaaatgatggtccgctacaaggcgaagaggggagag
agcatccatagcttgtcgtttccgttctcgggttaccggcccggccagcgtcatttcgct
gctgcagtctacacttcgattgcagagggggccaatctcttcgcgcaggcacccacaggc
atcggcaaaacgatgtccacccttttcccggcggtcaaagcccttggagaggataaggtg
tccggcatcttctatctgaccgccaagacagttacacggattgcggcacaggaggcggtg
atgatgctgaacagccgggggctgcatctgcatgtgattacgcttacggccaaggagaag
gcgtgtttccgtgaggatggaagctgcggcgcggattcctgtccttttgccgaaggctac
tatgaccggatcaatgccgccatgctcgatatgctggagcacgaaatgctgatgacgcgc
gagatcattgccgcgtatgcccgaaagcatgaggtgtgcccgttcgaattctccctggat
gctgcctacgcctgcgacattgttatctgcgattataactatatctatgatccccggatc
agcctgaagcggctgtccgaggagcggaagaaaaaaactgtgctgcttgtggatgaagcg
cacaatctggtagaccgggggcgggagatgtactccgcctcgctgaccaaggcgccgttc
ctggcacttcagcggcagtacaaaacagtgaatccgcggctaagcagcgcggcgagggcc
gtaaatgccttcttcattgcgctgcgtaaaagctgcggggacaagggggctggagaatgg
aaggagtatcacgcagagctgccggagctgctcgagcttttcgcttccgaagccgaactg
gagctgctgcattcttcctcactgatcactccgccggcggagggggaagccggcagtctg
ctggatacgtactatgcggtgcaggggatgctgcgtacgttcaagacctatgatgagcgt
tacatgacctatgcggaagtgcgcagcggtgatgtgtacctgaagctgttcaatctcgat
ccgtcgcatttgctgcagcagatgggtgggagcttccgcagccaaatcctgttctctgcc
acgctctcgccgctctcctattacagggatatgatcggcgcagatgaggaggactatagc
ctgagcctgtcctcgccttttcataaagagcagtggcaggtatctgtgcttccggtatcc
acccgctaccatgaccgggacgcctccttacagccgcttagcgatgcactgaaagggatg
gtctcaaggaaagggaattacctggtcttcttcccctcttatctctatttgaagaatgta
tatgaagtgttcactgagaaataccctgaagtcgctaccctgctgcagggcagcgggatg
agcgagaccgagcgggagaacttccttgcagcgttccgcccggacaatccggataccctg
ctcggctttgctgtgctgggcgggattttctccgaaggggtggatttgccgggtgaccgg
ctgaatggtgtgatggtggtcggggtcggcctgccgcaggtagggctggagcgcaatctg
ctgcggagctactttcaagcgcagggcaagaacggattcgattacgcctatgtctacccg
ggcatgtgcaaggtgcagcaggcagggggccggctgatccgcagcgagaacgacagcggc
attattgtgctggcggatgaccgttttctccagagttcttaccggcaactgctccccgag
gagtggcgggactactttgtcatggcataa
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