Pseudomonas aeruginosa PA1R: PA1R_gp0045
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Entry
PA1R_gp0045 CDS
T02929
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paer
Pseudomonas aeruginosa PA1R
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paer03032
]
PA1R_gp0045
03400 DNA repair and recombination proteins [BR:
paer03400
]
PA1R_gp0045
Enzymes [BR:
paer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PA1R_gp0045
DNA replication proteins [BR:
paer03032
]
Prokaryotic type
DNA Topoisomerases
PA1R_gp0045
DNA repair and recombination proteins [BR:
paer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PA1R_gp0045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AHA21822
LinkDB
All DBs
Position
56720..57721
Genome browser
AA seq
333 aa
AA seq
DB search
MSAAPPDIPALPAGLCYVDDRQPGIRRRRQGKRFVYFDADGQRIGDAEEIRRLDKLAIPP
AYREVWICPDPNGHLQATGRDARGRKQYRYHPRWREVRDADKYERLLRFGQALPGLRRHI
DAQLRLPGLGRDKVVALAVALLDATLIRVGNHRYARDNRSYGLTTLRTRHVDVNGSRIRF
RFKGKSGIEHDVSLEHPRLARVLRRCLELPGQDLLQYLDEDGQPHRIGSHDINEYLRRHT
GEDFSAKDYRTWAGSALALERLRRAEADGLGAVVAEVAAELGNSVAICRQCYIHPAIIEA
YQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcgccaccggatatccccgccctgcccgccggcctctgctacgtcgacgac
cgccagccgggcatccgtcgacgccggcagggcaagcgcttcgtctatttcgacgccgac
ggccagcgcatcggcgacgccgaggaaatccgccggctggacaagctggccattccgccg
gcctatcgcgaggtctggatctgtcccgaccccaacggccatctccaggccaccggccgc
gacgcccgtgggcgcaagcagtaccgttaccacccacgctggcgcgaggtacgcgatgcc
gacaagtacgagcgcctgctgcgcttcggccaggcgctgccggggctgcgccggcacatc
gacgcccagttgcgcctgcccggcctcggtcgcgacaaggtggtggccctggcggttgcg
ctgctcgacgccaccctgatccgcgtcggcaaccaccgctacgcccgcgacaaccgctcc
tacggcctgaccaccctgcgtacccggcacgtcgacgtgaacggcagtcgcatccggttc
cgcttcaagggcaagagcggcatcgagcacgacgtcagcctggagcatccgcgcctggcg
cgggtgctgcggcgctgcctggaactgcccggccaggacctgttgcagtacctggacgag
gacggccagccgcaccgcataggctcccacgacatcaacgagtacctgcgccggcacacc
ggcgaggatttcagcgccaaggactaccgcacctgggccggcagcgcgctggcgctggag
cgcctgcggcgtgccgaagccgacgggctcggcgcggtggtcgcggaggtcgccgccgaa
ttgggcaacagcgtggcgatctgccggcaatgctacatccacccggcgatcatcgaggcc
taccaggccgggcaactgggccagctcaggcgcgcccgcaagcgccgctggctgagtgcc
gaggaagcgaccctgctggccttcctcgacacgcccggctga
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