KEGG   Pseudomonas aeruginosa PA1R: PA1R_gp0159
Entry
PA1R_gp0159       CDS       T02929                                 
Name
(GenBank) Sigma-54 dependent transcriptional regulator
  KO
K11917  sigma-54 dependent transcriptional regulator
Organism
paer  Pseudomonas aeruginosa PA1R
Brite
KEGG Orthology (KO) [BR:paer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:paer03000]
    PA1R_gp0159
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paer02044]
    PA1R_gp0159
Transcription factors [BR:paer03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PA1R_gp0159
Secretion system [BR:paer02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PA1R_gp0159
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase HTH_30 AAA_2 AAA_16 AAA HTH_8 bpMoxR FixP_N AAA_19 AAA_3 Sigma70_r4
Other DBs
NCBI-ProteinID: AHA21936
LinkDB
Position
complement(189209..190294)
AA seq 361 aa
MSVITHPHARELTKSVRATVLVFNDPRSRELLERIERLAPSEANALVIGETGTGKELVAR
HIHALSGRNGGPFVAVNCGAFAESLVESELFGHEKGAFTGALQSKAGWFEAANGGTLFLD
EIGDLPPSIQVKLLRVLQEREVVRLGSRRPIPIDVRLVAATNVDLADAVVAGHFREDLFY
RLHVATIQLPPLRERRGDILPLAEYFIVEHCRRLGYTSASLSPEAERKLLGHSWAGNIRE
LENAIHHALLVCRNRLIQPADLHLIDMRARQEPSGLRRAPESAAGSALEAALQALFEENR
EDLYEHIEETVFRAAYRFCHGNQLQTGRLLGISRNIVRARLEKIGELETSPRHNVVSLVG
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtccgtcatcacccatccccacgcccgcgagctgaccaaatcggtgcgcgccaccgtg
ctggtgttcaacgacccccgttcccgcgagctgctggagcgcatcgagcgcctggcgccc
agcgaggccaacgcgctggtcatcggcgagaccggcaccggcaaggagctggtggcgcgc
catatccatgccctcagcggacgcaacggcggcccgttcgtcgcggtcaactgcggtgct
ttcgccgagagcctggtggagagcgagctgttcggccacgagaagggcgcctttaccggt
gcgttgcagagcaaggccggctggttcgaggcggccaacggcggcaccttgttcctcgac
gagatcggcgacctgccgccgagcatccaggtcaagctgctgcgcgtgctgcaggagcgc
gaggtggtgcggctcggttcgcgccggccgatccccatcgacgtgcggctggtggcggcg
accaacgtcgacctggccgacgcggtggtcgccgggcacttccgcgaggacctgttctac
cgcctgcacgtggcgaccatccaactgccgccgttgcgcgagcgccgcggcgatatcctg
ccgctggccgagtacttcatcgtcgagcactgccggcgccttggctacaccagcgcgagc
ctgagcccggaagccgagcgcaagctgctcgggcattcctgggcgggcaatatccgcgag
ctggagaacgccatccaccacgcgctgctggtctgccgcaaccgcctgatccagccggcc
gacctgcacctcatcgacatgcgtgcgcgccaggagccgagcggcttgcgccgcgccccc
gagagcgccgccggctcggcgctggaagcggcgctgcaggcactgttcgaggaaaaccgc
gaggatctctacgagcacatcgaggaaaccgtgttccgcgccgcctatcgcttctgccac
ggcaaccagttgcagaccggacgcctgctggggatcagccgcaacatcgtgcgcgcccgc
ctggagaagatcggcgagctggaaacctcgccacgacacaacgtggtctcgctggtgggc
aagtga

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