Pseudomonas aeruginosa PA1R: PA1R_gp0166
Help
Entry
PA1R_gp0166 CDS
T02929
Name
(GenBank) Uncharacterized protein ImpC
KO
K11900
type VI secretion system protein ImpC
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PA1R_gp0166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paer02044
]
PA1R_gp0166
Secretion system [BR:
paer02044
]
Type VI secretion system
Imp/Vas secretion system core components
PA1R_gp0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
AHA21943
LinkDB
All DBs
Position
198733..200217
Genome browser
AA seq
494 aa
AA seq
DB search
MPKSSAAEQSGESSTQTLSLLDEIIAKGRMAHDDSQQDYARDMLAEFATQVLDEGMAVDK
DTVAMINDRISQIDALISDQLNQIIHHPELQKLEASWRGLHQLVSNTETSARLKLRLLNV
GKNELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLIGDFTFGRHPQDIGLLEKLS
NVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLTKIFESLELIKWRAFRESEDSRYVSLV
LPNFLLRLPYGPETRPVEGMNYVEDVNGTDHSKYLWGNAAWVLAQRITEAFAKYGWCAAI
RGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAV
FFGGQTTNKARLYNTNEANANARLSAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQT
YLNNWIADYVLINDNAPQEIKAQYPLREARVDVSEVAGKPGAYRATVFLRPHFQLEELSA
SIRLVANLPPPVAA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtcatccgccgccgaacaatccggcgagagttcgacccagaccctgtccctg
ctcgacgagatcatcgccaagggccgcatggcccacgacgacagccagcaggactatgcc
cgcgacatgctcgcggaattcgccacccaggtcctcgacgagggcatggccgtcgacaag
gacaccgtggcgatgatcaacgaccgcatcagccagatcgatgcgctgatcagcgaccag
ctcaaccagatcatccaccaccccgagttgcagaagctggaagcctcctggcgcggcctg
caccaactggtgagcaacaccgagaccagcgcgcggctcaagctgcgcctgctgaacgtc
ggcaagaacgaactgcagaacgacctggagaaggcggtcgaattcgaccagagcgcactg
ttcaagaagatctacgaagaggaatacggcaccttcggcggacaccccttcagcctgctg
atcggcgacttcaccttcggtcgccatccgcaggacatcggcctgctggagaagctgtcg
aacgtcgccgcggctgcccacgcgccgttcatcgccgccgccagcccacgcctgttcgac
atgaacagcttcaccgaactggccgtgccacgcgacctgaccaagatcttcgagagcctg
gagctgatcaagtggcgcgccttccgcgagagcgaggactcgcgctacgtgtcgctggtg
ctgccgaacttcctcttgcgcctgccctacggcccggagacgcgaccggtggaaggcatg
aactatgtcgaggacgtcaacggcaccgaccactccaagtacctctggggcaacgccgcc
tgggtcctggcgcagcgcatcaccgaggccttcgccaagtacggctggtgcgcggcgatc
cgcggcgcggaaggcggcggcgcggtcgagggcctaccggcgcacacgttccgcaccagc
tccggcgacctgtcgctgaagtgcccgaccgaggtggcgatcaccgaccgccgcgagaag
gaactcaacgatctcggcttcatttccctgtgccacaagaagaacagcgacgtggcggtg
ttcttcggcggccagaccaccaacaaggccaggctctacaacaccaacgaggccaacgcc
aacgcgcgcctgtcggcgatgctgccgtacgtgctggcggcatcgcgcttcgcccactac
ctgaaggtgatcatgcgcgacaaggtcggcagcttcatgacccgcgacaacgtgcagacc
tacctgaacaactggatcgccgactacgtgctgatcaacgacaacgcaccgcaggaaatc
aaggcgcagtacccgctgcgcgaggcgcgggtggatgtcagcgaggtggccggcaaaccg
ggggcctaccgcgccacggtgttcctccggccgcacttccagctcgaggaactcagcgcg
tcgatccgcctggtcgccaacctgccgccgccggtagcggcgtga
DBGET
integrated database retrieval system
