Pseudomonas aeruginosa PA1R: PA1R_gp0340
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Entry
PA1R_gp0340 CDS
T02929
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PA1R_gp0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paer03400
]
PA1R_gp0340
Enzymes [BR:
paer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PA1R_gp0340
DNA repair and recombination proteins [BR:
paer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PA1R_gp0340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AHA22117
LinkDB
All DBs
Position
445408..446220
Genome browser
AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK
GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP
TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF
LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVL
QSRFKDAGIDYDLRGMEKPSDHAPIWLELA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctctttcaatatcaacggtctgcgcgcccggccgcaccagttggcggcg
ctgatcgagcggcaccagcccgacgtgatcgggctgcaggaaaccaaggtcgccgacgac
cagtttccccaggccgagatcgaggcgctcggctaccacgtccactaccacgggcagaaa
ggccactacggcgtcgccctgctctcccgccaggcgcccctggaactgcatcgcggcttc
ccgagcgacggcgaggaatcccagcggcgcttcatctggggcaccttcagcgacgcccag
ggcaacccgatcaccgtgatgaacggttacttcccgcaaggcgagaaccgcgagcatccg
accaagttcccggccaagcagcgcttctacgccgatctccagtcgctgctggagaacagc
ttcaagcccgagcaggccctggtggtgatgggcgacatcaatatctcgccggaggactgc
gacatcggcattggcgaggaaaaccgcaagcgctggctgaagaccggcaagtgcagcttc
ctgccggaagagcgcgaatggctggctaccttgaagaactggggcctggtcgacagcttc
cgggccctgaatccggaggtgaacgaccgcttcagctggttcgactaccgcagccgtggc
ttcgaggacaaccccaagcgcggcctgcgcatcgatgtgatcctggccagccgggtgctg
cagtcgcgcttcaaggacgccggcatcgactacgacctgcgcggcatggagaagccctcc
gatcacgccccgatctggctggaactggcctga
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