Pseudomonas aeruginosa PA1R: PA1R_gp0539
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Entry
PA1R_gp0539 CDS
T02929
Name
(GenBank) Superfamily I DNA and RNA helicase and helicase subunits
KO
K04067
primosomal replication protein N''
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PA1R_gp0539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paer03400
]
PA1R_gp0539
DNA repair and recombination proteins [BR:
paer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PA1R_gp0539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
Pkinase
MTES_1575
AAA_11
DUF4011
PK_Tyr_Ser-Thr
AAA_19
UvrD-helicase
AAA_30
SLFN-g3_helicase
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
AHA22312
LinkDB
All DBs
Position
657873..664169
Genome browser
AA seq
2098 aa
AA seq
DB search
MIRFCPNCQSERSLSEIFCEGSIQGQPCGWDLSAEAIHPAGWRPQPVLTQEAIAPPASEP
PAASAPLCANGHPLQPGDLMCLECGAAPAEGPLPMQAEATPQPAVTETLIDGWRLLRQIA
SSDGVRERYLAEHAESARQAVLTLYRPGAEPDPAIYDVIRRLPREHVPEILATGRWDERA
YEVVEELTGGSLADLGTVLEDREAVRHVVRELGHALHVFNEAGLRHRDLRPASLLVRSHE
PLDLVISGFGSARLSEFDLDIVSPLETSRYMAPEAIAGGVAAASDWWSLGMILLEQLTRG
SCFEGVNANAFLIHVLANGVALPDDLDPQLHLLLRGLLARDRHQRWQWPQVQAWLNGEAV
DAPASADSEKDDAEGASIALGARRFRKPTVFALAAAQAEHWAEALDHLLRGAIVTWAEHI
GLSPRLLAGLRQVAQHEGLEDDFRLMLALKLLNPEIPLIQRGEIVTPGWLLEHPLEGYRL
ISGSVPDLLEQLHTESWLSRLKTRAENVRQRALHQHIELAEEQLRIYLLSTSRARLAAQW
QERQRLLPDTEHPGLLALAERRVIAEEDLIVLLSANIGQFRAAEAIVEEAAGLARDADVH
LFDAETARGLLQHSRQELYRRVDERISGFARSGVPRVDEWAEQFRLERRMPLARVLVLLA
IPPEQWLEPQKQQYVSQILDFFEKKVVAAVMRGPLVRMSIGKSTPRIDLNELHSARRPAA
ALLDHLLQRNARAVSLDPDSFLANPQLEVRLNALSRQSSLYKRDTGIDGLYLGFPFLLNR
DPRGTTRTRIVPLLLWPLKLQLEVGSRGQVALAFDGEREEVRLNPALESLLGPEPCKRWR
KVADELLGRSALRAADVMDAFGLLATPRARVLEGLPPSSTEVTPYQDQLACAAVLFHVTF
MGQAIGEDLRQLKSLPPSGTGLETALRLRENGEPEARESPPELQRYFTVASDPSQEAAVL
QARQSPGLLVEGPPGTGKSQTIVNMVADAIGRQRSLLIVCQKHAALEVVHKRLVAEGLGQ
RIVMLNDVNRDREPVIRNIREQLEALFADAGGAQGWERQRERLAARIEALEGELDRYHQS
LHRVDEATGLSYRRLLGELIELEKGSPPLDFPALRQRLAALDIGSLARLEENCAPLVRLW
LPARYEGSPLAQLRAFATDQATLQAFADSLRAFGEAENARQKALDEHPASFEVDDPTPYR
AWLASQVGTLLNLREEQRQRLAHWLPLFRDAAPGQPSRGDGLLAEAEQIERQLRQLDLER
HAPLLSPALAMLEENNLERFQAHARQVLEARTWLARLNPLRLLRRGRLRRFLREHGEADD
DSRLAALLGACGLERQWRPLRRQLAALQQSLGLATVATDAGPELTGLAGSASQQLREIQV
LARSLAQAPRAEQLDAVILTGEKQRFEALLGDLDAALIRQAARQLSLDKLKVLADWLGDE
LLEQLHRAIAGNQSNLPALGRLREALPQLVAYQRFRGRAGQLEATELEFLALLRQRQERL
DAIPAEALEATVRRMLNREARLGWKQRLEQDNPELLFSQDEARARVASLAEADVQMRALN
RELLGKGIDAARLGSRKQWEDVTRLTGKRSRRLREFIELGAELGLMSLRPVWLMNPDLAS
RVLPLKAGLFDMVIYDEASQMPVEFALPTLYRGRVTVVSGDEKQMPPTAFFSSRVESDEA
ELFDGEAPDEDADEEQREAYEDTWNRREIKDCPDLLQLARNALPSTTLQIHYRSAYRELI
GFSNASFYGNRLSVPVRHPQANILRIKPLELIQVNGLYQNQSNEREAERVVDYLAELWRQ
PYAARPSVGVVTFNRKQADLIEERLELRAEQDEAFRAAYSEERERSEDGEDMGVFVKNVE
NVQGDERDVIVFSSTFGRNGQGSFRRNFGVLGQTGGERRLNVAVTRARRKVVMITSMPIG
DISDMLGTQRSPSSPRDYLQGYLEYARALSAGEFAGTGQLLERLQTDRSDQRRQHYQRHD
GFSEIVGEYIRSLGWSAAPASEGDAFGLDFAIENPATGLYAIGIECDAPCHPLLERARAR
EIWRPSVLRRAIPHLHRVSSQGWYHDGDNERARLRAAIEKALAPSTETHPTAAAEASQ
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtttctgccccaactgccagagcgaacgctcgctttcggaaatcttctgcgaa
ggctcgatccagggccagccctgcggctgggacctttccgccgaagccatccatcccgcc
ggctggcgaccacagccggtgctgacccaggaagccatcgcgccgcccgccagcgagccg
ccagcggcgtccgccccgctctgcgccaacggccacccgctgcaacccggcgacctgatg
tgcctggagtgcggcgccgcgccggccgaaggcccgctgccgatgcaggccgaggccacg
ccgcagcccgccgtcacggaaaccctgatcgacggctggcgtctgctgcggcagatcgcc
agcagcgacggcgtgcgcgagcgctacctggccgaacacgcggaaagcgcccgccaggcg
gtgctcaccctgtatcgcccgggcgccgagccggacccggcgatctacgacgtgatccgc
cgcctgccgcgcgaacacgtaccggaaatcctcgccaccggccgctgggacgagcgcgcc
tacgaagtggtcgaggagctcaccggcggcagcctcgccgacctcggcaccgtgctggag
gaccgcgaggcggtgcgccacgtggtccgcgagctgggccacgccctgcacgtgttcaac
gaagccggcctgcgccaccgcgacctgcgcccggccagcctgctggtgcgcagccacgag
ccgctggacctggtgatcagcggcttcggctcggcgcgcctgtcggagttcgacctggat
atcgtctcgccgctggagaccagccgctacatggcccccgaggcgatcgccggcggcgtg
gcggcggcttccgactggtggagcctgggcatgatcctgctggagcagttgacccgcggc
tcctgcttcgaaggagtcaacgccaacgccttcctgatccacgtgctggccaacggcgtg
gcgctgcccgacgacctcgacccgcagttgcacctgctgctgcgcggcctgcttgcacgc
gaccgccaccagcgctggcagtggccgcaggtacaggcctggctgaacggcgaggcggtg
gacgcgccggcctcggcggacagcgaaaaggacgacgccgaaggcgccagcatcgccctc
ggcgcacggcgcttccgcaagccgacggtcttcgccctggccgcggcccaggccgagcac
tgggcggaggccctcgaccacctgctgcgcggggcgatcgtcacctgggccgagcacatc
ggcctgtcgcccaggctgctcgccggcctgcgccaggtggcccagcacgaggggctggag
gacgacttccggctgatgctggcgctcaagctgctgaacccggaaatcccgctgatccag
cgcggcgagatcgtcacccccggctggctgctggagcatccgctggagggctaccggctg
atcagcggctcggtgcccgacctgctcgaacagttgcacaccgaaagctggctgtcgcgg
ctcaagacccgcgccgagaacgtccgccagcgcgccctgcaccagcacatcgaactcgcc
gaagaacagttgcgcatctacctgctgtcgacctcgcgggcgcgcctcgccgcgcagtgg
caggagcgccagcgcctcctgccggacaccgagcaccccggcctgctggccctggccgag
cgccgggtgatcgccgaggaagacctgatcgtcctgctcagcgccaacatcggccagttc
cgtgccgccgaggcgatcgtcgaggaagccgccggcctggcccgcgacgccgatgtgcac
ctgttcgacgcggagaccgcgcgcggcctgttgcagcactcgcggcaggagctgtaccgc
cgcgtcgacgaacgcatcagcggcttcgcccgcagcggcgtgcccagggtcgacgaatgg
gccgagcagttccgcctggagcggcgcatgccgttggcgagggtcctggtgctgctggcg
atcccgccggaacagtggctggaaccgcagaagcagcagtacgtgtcgcagatcctcgat
ttcttcgagaagaaagtggtcgccgcggtgatgcgcgggccgctggtgcgcatgagcatc
ggcaagagcaccccacgcatcgacctcaacgaactgcacagcgcgcgacgccccgccgcc
gccctgctcgaccatctgctgcaacgcaacgcccgcgcggtgagcctcgacccggacagc
ttcctcgccaacccgcaactggaagtgcggctcaacgcgctgtcccggcaaagctcgctg
tacaagcgtgacaccggcatcgacggcctctacctgggcttccccttcctgctcaaccgc
gacccgcgcggcaccacccgcacgcgcatcgtgccgctgctgctgtggccgctgaagctg
cagctggaagtcggcagccgtggccaggtggcgctggccttcgacggcgagcgcgaggaa
gtgcgcctcaacccggccctggaaagcctgctcggccccgagccgtgcaagcgctggcgc
aaggtcgccgacgaactgctcggccgctccgcgctgcgcgccgccgacgtgatggatgcc
ttcggcctgctcgccaccccgcgtgctcgggtgctggaaggattgccgccgagttccacc
gaggtcacgccctaccaggaccaactggcctgcgccgcggtgctgttccacgtcaccttc
atgggccaggcgatcggcgaggacctgcgccagttgaagagcctgccgccctccggcacc
ggcctggagaccgcgctgcgcctgcgcgagaacggcgagccggaagcccgcgagagcccg
ccggagttgcagcgctacttcaccgtggccagcgacccgtcccaggaggccgccgtgttg
caggcccggcagagcccggggctgctggtggaaggcccgcccggtaccggcaagagccag
accatcgtcaacatggtcgccgacgccatcggccgccagcgcagcctgctgatcgtctgc
cagaagcacgccgccctggaagtggtacacaagcgcctggtggccgagggcctgggccag
cgcatcgtcatgctcaacgacgtcaaccgcgaccgcgaaccggtgatccgcaacatccgc
gagcagctcgaagcgctgttcgccgacgccggcggcgcccagggctgggagcgccagcgc
gagcgcctggcggcgcgtatcgaggcgctggaaggcgaactggaccgctaccaccagagc
ctgcaccgcgtggacgaggccaccgggctgagctaccggcgcctgctcggcgaactgatc
gagctggagaaaggctcgccgccgctggacttcccggccctgcgccagcgcctggcggcg
ctggacatcggcagcctggcgcgcctggaggaaaactgcgcgccgctggtccgcctctgg
ctaccggcccgctacgaaggcagcccgctggcgcaactgcgcgccttcgccaccgaccag
gccaccctgcaagccttcgccgacagcctgcgcgccttcggcgaagcggagaacgcccgg
cagaaagccctcgacgaacacccggcgagcttcgaggtcgacgacccgacgccctaccgc
gcctggctggcaagccaggtcggtaccctgctgaatttgcgcgaggagcagcgccagcgc
ctggcccactggctgccgctgttccgcgacgccgcgccaggacagccgagccgtggcgac
ggcctgctggcggaggccgagcagatcgaacggcaactgcgccagctcgacctcgaacgg
cacgcgccgctgctgtctcctgccctcgccatgctcgaagagaacaacctcgaacgcttc
caggcccacgcccgccaggtactcgaggcacgcacctggctggcccggctcaacccgctg
cgcctgctgcggcgcggccgcctacggcgtttcctgcgcgagcacggcgaggccgacgac
gacagccgcctggccgccctcctcggcgcctgcggcctggagcgccagtggcggccgctg
cgccggcaactggcggcgctgcaacagagcctggggctggcgacagtcgccaccgatgcc
ggtccggaactgaccggcctggccggcagcgccagccagcaactgcgcgagatccaggtc
ctggctcgcagcctggcccaagcgccacgcgccgagcagctcgacgcggtgatcctcacc
ggcgagaaacagcgcttcgaagcgctgctcggcgacctcgacgccgcgctgatccgccag
gccgcacgccagctcagcctggacaaactcaaggtgctcgccgactggctcggcgacgaa
ctgctggaacagctgcaccgcgccatcgccggcaaccagagcaacctgccggccctcggc
cgcctgcgcgaggcgctgccgcaactggtcgcctaccagcgcttccgtggccgcgccggc
cagctcgaagccaccgagctggaattcctggccctgctgcgccagcgccaggaacgactc
gacgcgattcccgccgaagcactcgaagccacggtgcgccgcatgctcaatcgcgaagcg
cggctgggctggaagcagcgcctggaacaagacaatccggaactgctgttcagccaggac
gaagccagggccagggtcgccagcctcgccgaagccgacgtgcagatgcgcgcgctgaac
cgcgaactgctcggcaagggaatcgacgccgcgcgcctgggcagccgcaagcagtgggaa
gacgtcacccgcctgaccggcaagcgctcgcggcgcctgcgcgagttcatcgagctgggc
gccgaactcggcctgatgagcctgcgcccggtctggctgatgaaccccgacctggccagc
cgcgtgctgccgctcaaggccgggctgttcgacatggtgatctacgacgaagcctcgcag
atgccggtggagttcgccctgccgaccctctatcgcgggcgggtcacggtggtcagcggc
gacgagaagcagatgccgccgaccgcgttcttctccagccgcgtggaaagcgacgaggcc
gaactgttcgacggcgaagcgcccgacgaggacgccgacgaggagcagcgcgaagcctac
gaggacacctggaaccgccgcgagatcaaggactgcccggacctcctgcaactggcgcgc
aacgccctgcccagcaccaccttgcagatccactaccgctcggcctaccgcgagctgatc
ggcttctccaacgcctcgttctacggcaaccgcctgagcgtgccggtacgccatccgcag
gccaacatcctgcgcatcaagccgctggaactgatccaggtgaacggcctgtaccagaac
cagagcaacgagcgcgaggccgagcgagtcgtcgactacctcgccgaactctggcgccaa
ccctacgcggcgcggccgtcggtgggcgtggtcaccttcaaccgcaagcaagccgacctc
atcgaggagcgcctggaactgcgcgccgagcaggacgaggcgttccgcgccgcctacagc
gaggagcgcgagcgcagcgaagacggcgaggacatgggcgtgttcgtgaagaacgtggag
aacgtgcagggcgacgagcgcgacgtgatcgtcttctcctccaccttcggccgcaacggc
cagggcagcttccggcgcaacttcggcgtgctcgggcagaccggcggcgagcgccgtctc
aacgtggcggtgacccgcgcgcggcgcaaggtggtgatgatcacctcgatgccgatcggc
gacatctccgacatgctcggcacccagcgctcgccgagcagcccgcgcgactacctgcaa
ggctacctggaatacgcccgcgcactgtccgccggcgaattcgccggcaccggccagctg
ctcgagcgcctgcaaaccgaccgcagcgaccagcgccgccagcactaccagcggcacgac
ggcttcagcgagatcgtcggcgagtatatccgctcgctgggctggtccgccgcgcccgcc
agcgaaggcgacgccttcggcctcgacttcgccatcgagaacccggccaccggcctctac
gccatcggcatcgaatgcgacgccccctgccacccgctgctggaacgcgcccgcgcccgg
gaaatctggcgcccctcggtgctgcgacgggcgatcccgcacctccaccgggtttcctcc
cagggctggtaccacgacggcgacaacgaacgcgcacggctgcgcgccgccatcgagaaa
gccctggcgcccagcacggaaacccatcccacggcagcagcggaggcctcccaatga
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