Pseudomonas aeruginosa PA1R: PA1R_gp0981
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Entry
PA1R_gp0981 CDS
T02929
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PA1R_gp0981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paer03400
]
PA1R_gp0981
DNA repair and recombination proteins [BR:
paer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PA1R_gp0981
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PA1R_gp0981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DNA_pol_A
Motif
Other DBs
NCBI-ProteinID:
AHA22740
LinkDB
All DBs
Position
complement(1112797..1114809)
Genome browser
AA seq
670 aa
AA seq
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MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKTFFPHNSVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQ
MRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHLDRGDRIDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRAPGEPPPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKETL
VEYGFRLPSALDNRPLRFEEWEAVSPQTIFVSATPGPYEAEHAGRVIEQVVRPTGLVDPE
IEVRPAMTQVDDLLSQIRQRVAKDERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRAGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLHGKAILYADNVTGSMQRAIDETERRRAKQIAFNEAHGIVPKGVRKDIKDILEGAVV
PGARGKRKGVAKVAEESGRYENELRSPSEISKRIRQLEEKMYQLARDLEFEAAAQLRDEI
QTLRERLVNV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttccaactcgactcgcgcttcaagcccgccggcgaccagccggaagccatc
cggcagatggtcgaggggctggaggcggggctttcgcaccagaccctgctgggggtgacg
ggctctggcaagactttcagcatcgccaacgtgattgcccaggtgcagcgcccgaccctg
gtcctggcgccgaacaagaccctggcggcccagctctacggggagttcaagacgttcttc
ccgcacaattccgtggagtacttcgtttcctactacgactactaccagccggaggcctac
gtcccgtcttccgatacctatatcgagaaggactcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgctcgagcgtccggatgcgatcatcgtcgccacc
gtgtcgtccatctacggcctcggtgatcccgcgtcctacctgaagatggtcctgcacctg
gaccgcggcgaccgcatcgaccagcgcgaactgctgcggcgactgaccagcctgcagtac
acccgcaacgacatggatttcgcccgtgcgactttccgtgtgcgtggcgatgtgatcgac
atcttcccggccgaatccgatctcgaggcgattcgtgtcgagttgttcgacgacgaggtg
gaaagcctctcggccttcgatccgctcaccggcgaggtgatccgcaagctgccgcgcttc
accttctaccccaagagccactacgtgaccccgcgcgagacgctgctggaggcggtcgac
cagatcaaggccgaactcaaggaacgcctagactacctgcgcaacaacaacaagctggtg
gaagcgcagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgagctgggc
tactgcaacggcatcgagaactactcgcgctatctttccgggcgggcccccggcgagccg
ccgccgacgctctacgactacctgccggccaactcgctgctggttatcgacgaatcgcac
gtcagcgttccgcaggtcggtgcgatgttcaagggcgaccgctcgcgcaaggagaccctg
gtggaatacggtttccgcctgccttcggcgctggacaaccggccgctgcgcttcgaagag
tgggaggcggtgagtccgcagaccatcttcgtctccgccaccccgggcccctacgaggcg
gagcatgccgggcgggtcatcgagcaggtggtgcgtcccaccgggctggtcgatccggag
atcgaggtacgtccggcgatgacccaggtggacgacctgctctcgcagatccgccagcgt
gtggccaaggacgagcgggtgctggtgactaccctgaccaagcgcatggccgaggacctc
accgattatctcggcgatcacgacgtgcgggtgcgctacttgcactcggacatcgatacc
gtcgagcgagtggagatcatccgcgacctgcgcgccggtgcgttcgacgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgcccgaggtgtcgctggtggcgatcctcgac
gcggacaaggaaggcttcctgcgctcggagcgctcgctgatccagaccatcggtcgtgcc
gcgcgcaacctgcacggcaaggcgatcctctacgccgacaacgtcaccggctcgatgcag
cgtgcgatcgacgagaccgagcggcgtcgggccaagcagatcgccttcaacgaagcccat
ggcatcgtgcccaagggggtgcgcaaggacatcaaggacattctcgaaggcgccgtggtg
cccggcgcgcgcggcaagcgcaagggcgtggccaaggtggcggaggagagcgggcgctac
gagaacgaactgcgctcgccgagcgagatcagcaagcgcatccgccaactggaggaaaag
atgtaccagttggcccgcgacctggagttcgaggcggcggcgcaactgcgcgacgagatc
cagacgctgcgcgagcgcctggtcaacgtctga
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integrated database retrieval system
