Pseudomonas aeruginosa PA1R: PA1R_gp2179
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Entry
PA1R_gp2179 CDS
T02929
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
paer
Pseudomonas aeruginosa PA1R
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paer03400
]
PA1R_gp2179
DNA repair and recombination proteins [BR:
paer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PA1R_gp2179
Archaeal homologous recombinant proteins
PA1R_gp2179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
AAA_15
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHA23922
LinkDB
All DBs
Position
2441845..2445480
Genome browser
AA seq
1211 aa
AA seq
DB search
MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR
LESTSASSKVPDGRNELSSNDERNLLRRGCASGYAEVDFVGIDGHRYRARWETRRSRDKA
DGALQKSQQSLQDLETQQMLAANKKSEFREQLEQKLGLNFAQFTRAVLLAQSEFSAFLKA
SDNDRGALLEKLTDTGLYSQLSKAAYQRASQADEQRKQLEQRLEGSLPLAEQARAGLEAA
LESHAQARLQEQQALQRLEGQQQWFTEEQRLLQSCEHAQGQLAEARQAWDALATERETLQ
WLERLAPVRGLIERLKQLEQELRHSEQQQRQRTEQQAAGAERLQGLQARLQEARERQAQA
DNHLRQAQAPLREAFQLESEARRLERTLAERQELHRQSNQRHAQQSDAARQLDMQQQRHV
AEQAQLQAALRDSQALAALGDAWATHQGQLAAFVQRRQRALESQAQLPELEKSLAQAGEP
LERLQAQWTALHGSEPDDLAARLDELRRQTDSLERQQALHKEWQQALDQRTGLARRLGEL
DQRMVEQEQALLDLKRQGSQCAEEVKAAEQALQVTRELLQRQRLARSASVEQLRAGLVDG
EACPVCGSQEHPYHHSEQLLAALGEHDDQEQVRAEQSLERLRQTLVGLREGYSSQRERLN
QSRQEQQELTGQLAALDRQLDQWTLPEELRLLQPSAQLEWLAQRLDDLAGQRQQCQRDFD
RLIARQRQTQQLQQELRAAETILQQRQQALTEQRQRYEHLQQQVEEDSQQLRPLLSDEHW
QRWQADPLRTFQALGESIEQRRQQQARLQQIEQRLQELKQRCDESSWQLKQSDEQRNEAR
QAEERAQAELAELNGRLGAHLGQHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQL
RLAEALEHLQQQRQRQQDEFQRLQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQL
QRLQEEITRQQTLEAERQAQLLQHRRQRPETDREALEDNLRQQRERLAASEQAYLDTYSQ
LQADNQRREQSQALLAELERARAEFRRWGRLNELIGSSSGDKFRRIAQGYNLDLLVQHSN
VQLRQLARRYRLQRGGSELGLLVVDTEMGDELRSVYSLSGGETFLISLALALGLASMASS
KLRIESLFIDEGFGSLDPESLQLAMDALDNLQAQGRKVAVISHVQEMHERIPVQVRVQRE
GNGMSSLKVVG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaaccttgcctccctcgctggcgagcaggaaatc
gacttcacccgcgaaccgctgtccagcgccggcctgttcgccatcaccggcccgaccggc
gccggcaagagcaccgtactggacgccctgtgcctggccctgttcggcagcacgccgcgg
ctggaaagcacttcggccagcagcaaggttcccgatggccggaacgagctgtccagtaac
gacgaacgcaacctgctgcgtcgcggttgcgccagcggctacgccgaagtggatttcgtc
ggcatcgacggccaccgctatcgcgcccgctgggaaacccggcgctcccgggacaaggcg
gacggcgccttgcaaaagagccagcagagcctccaggacctggagacccagcaaatgctg
gcagcgaacaagaaaagcgagttccgcgaacagctggagcagaagctcggcctcaatttc
gcccagttcactcgcgccgtgctgctggcccagagcgaattcagcgccttcctcaaggcc
agcgacaacgaccgcggcgcattgctggagaaactcaccgacaccggcctgtacagccaa
ttgagcaaagccgcctatcagcgcgccagccaggccgacgagcagcgcaagcaactcgag
caacgcctggaaggcagcctgcccctggccgagcaggcccgggccgggctcgaggcggcg
ctggaatcccacgcccaggcgcgtctccaggagcaacaggcactgcaacgtctggaaggc
cagcaacaatggttcaccgaggagcagcggctgctgcaatcctgcgagcacgcacaaggt
caactggccgaggccaggcaggcctgggacgccctggcgacggagcgggaaaccctgcaa
tggctggagcgcctggctccggttcgcggactgatcgaacgcctgaagcaactcgagcag
gaactccggcactccgagcagcagcagcggcagcgcaccgagcagcaagccgcgggcgcc
gagcgcttgcaaggattgcaggcccgcttgcaggaggcgcgcgagcgccaggcccaggcc
gacaaccatctgcgtcaggcccaggcgccgttgcgcgaggctttccagctggagagcgag
gccaggcgcctggagcgaacgctggccgagcgacaggaactccatcggcaatcgaaccag
cgccacgcccagcaaagcgacgccgctcggcaactggatatgcagcagcagcgccatgtc
gcggaacaggcgcaactgcaggcggcattgcgcgacagccaggctctcgccgcgctcggc
gacgcctgggcgacccaccagggccagctcgccgccttcgtgcaacgtcgccagcgcgcg
ctcgaaagccaggcgcagctccccgagctggaaaaatccctggcccaggctggggaaccg
ctcgaacgcttgcaggcgcaatggaccgccctccatggcagcgagccggacgacctggcg
gcacgcctggacgaattgcgccggcagaccgatagcctggaacgacaacaagcgctccac
aaggaatggcaacaggccctcgaccaacgcaccggcctggctcgacgcctgggcgaactc
gaccagcgtatggtcgagcaggagcaggcattgctcgacctgaaacgacaaggcagccaa
tgcgccgaggaggtgaaggcggcggagcaggccctgcaggtcacccgcgagttgctccag
cgccaacgtctggcccgcagcgccagcgtcgagcaactgcgcgccggcctggtggacggc
gaggcctgtccggtctgcggcagccaggagcatccctatcaccattccgagcaactgctc
gccgccctcggtgaacacgacgaccaggagcaggtccgcgccgagcagtccctcgagcgg
ctgcgacagaccctggtcggtctgcgcgagggctattccagccagcgggaaagactcaac
cagagtcgccaggagcagcaggaactgacaggccaactggccgcgctcgatcggcaactg
gaccaatggacgctgccggaagaactgcgactcctgcagccgtccgcgcagttggagtgg
ctggcacaacgcctggacgacctggcagggcagcgccagcagtgccaacgagacttcgac
cggctgatcgcccgccagcgccagacccagcaattgcagcaggaactgcgggccgccgag
acgatcctgcaacagcgccagcaggcgctgacggaacaacggcagcgctacgaacatttg
cagcagcaggtcgaggaggacagccagcaattgcgtccattgctctccgacgagcactgg
cagcgctggcaggcagatccgctgcggactttccaggcactcggcgagtccatcgagcaa
cgccggcagcaacaggcgcggcttcagcaaatcgaacagcgtctgcaggagctcaagcag
cgctgcgatgaatcgagctggcaactgaagcaaagcgacgagcaacgcaacgaagcccgt
caggcagaggaaagggcccaggcggaactcgccgaactgaacggacgcctcggcgctcac
ctgggccagcacgcctgcgcccaggactggcagctatcgctggagcacgccgcgcaagcg
gcgcagagcgccgtcgagacgctccaggcgcccctggattcgctgcgcgaggaacaactg
cgactcgccgaagccctggaacacctgcagcagcaacggcagcgccaacaggatgagttc
cagcgccttcaggccgactggcaggcctggcgcgaacgccaggacaacctcgacgacagc
cgcctcgacgccctgctcggcctttccgaggaacaggcgacgcaatggcgggagcaattg
cagcgactgcaagaggagatcacccgccagcagacgctggaagcagagcgccaggcgcaa
ctgctccagcatcgccggcagcggccggaaaccgaccgcgaggcgctggaagacaacctg
cggcaacagcgcgaacgcctggccgccagcgaacaggcctacctggatacctacagccag
ttgcaggccgacaaccagcgccgcgagcagagccaggcgctgcttgccgaactggagcga
gcccgcgccgagttccgcagatggggccgcctgaacgaactgatcggttcgtccagcggc
gacaagttccgccgcatcgcccagggctacaacctcgacctgctggtgcagcacagcaac
gtgcagttgcgccagttggcgcggcgctaccgcctgcagcgcggcggcagcgaactgggc
ctgctggtggtggacaccgagatgggcgacgaactgcgctcggtgtattcgctctccggc
ggcgagaccttcctgatttccctggccctggcgctcggcctggcctctatggcatcgagc
aagctgcgcatcgagtcgctgttcatcgacgaaggcttcggcagcctcgacccggaatcc
ctgcaactggcgatggatgccctggacaacctgcaggcccaggggcgcaaggtggcggtg
atttcccacgtccaggaaatgcacgaacggatcccggtccaggtgcgggtccagcgcgag
ggcaacggcatgagcagcctgaaggtggtcggctga
DBGET
integrated database retrieval system
