Pseudomonas aeruginosa PA1R: PA1R_gp2215
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Entry
PA1R_gp2215 CDS
T02929
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PA1R_gp2215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paer03400
]
PA1R_gp2215
Enzymes [BR:
paer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
PA1R_gp2215
DNA repair and recombination proteins [BR:
paer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PA1R_gp2215
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PA1R_gp2215
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PA1R_gp2215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHA23958
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All DBs
Position
complement(2490471..2491907)
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AA seq
478 aa
AA seq
DB search
MNASIFWYDYETTGIDPRRDRPLQIAGIRTDEALNEIGEPMNLYCRPSDDILPHPMACLI
TGITPQRLAERGLSEADFMTRVHAQLAQPATCVAGYNSLRFDDEVTRYSLYRNFFDPYAR
EWQGGNSRWDLIDMVRTAYALRPEGIQWPQLDGRLSLKLEMLTAANGLEHGQAHDALSDV
RATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVRLLQPLVHVSGRFSAERHFLSVVLPL
AWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGELPVPLKQIQVNRCPV
VAPLSVLRAEDRQRTGIELEECQRKAELLRQHQTVWADKLTALYGEESFSASDDPEQQLY
DGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQELFFRYRARNFPETLNVAERQQWE
SFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPAVLAAWRDYAAELRQRYSLET
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgagtattttttggtacgactacgaaaccaccggcatcgaccctcgccgcgac
cggccgttgcagatcgccgggatccgcacggacgaggcgctgaacgagatcggcgagccg
atgaacctgtattgccgtcccagcgacgatatcctgccccaccctatggcttgcctgatc
accggcatcactccccagcggctggccgagcgggggctgtccgaggccgacttcatgacc
cgggtacacgcccaactggcgcagccggcgacctgcgtggccggctacaactccctgcgc
ttcgacgacgaagtgacgcgctacagcctgtaccgcaacttcttcgatccctacgcccgc
gagtggcaaggcggcaatagccgctgggacctgatcgacatggtccgtaccgcctatgcc
ctgcgcccggagggcatccagtggccgcagctggacggccggctgtcgctgaagctggaa
atgctcaccgcggcgaacggcctggagcatgggcaggcccacgacgcgctttccgatgtc
cgcgccaccattgccctggcccgcctgatccgtcagcgccagccgcgcctgtacgattac
ctctaccagttgcgcagcaagcacaaggtgctcgaccaggtgcgcctgctgcagccgctg
gtgcatgtctccggacgcttttccgcggagcgccatttcctctcggtggtcctgccgctg
gcctggcacccgcgcaaccgcaatgctctgatcgtctgcgacctctgcgccgatcccgcg
ccgctgctggagttgtcggccgaagacttgcgcaggcgcctgtatacccgtcgcgacgaa
ctggccgagggcgagttgccggtgccgctgaagcagatccaggtcaaccgttgcccggtg
gtggcgccgctgtcggtattgcgcgccgaggatcgccagcgaaccggcatcgaactcgag
gagtgccagcgaaaagccgagctgttgcgccagcatcaaaccgtctgggcggacaaactg
acagcgctatatggcgaagaaagtttctccgccagcgacgaccccgagcaacagttgtat
gacggatttattggcgatcgggatcgacgcctttgtgaacagctgcgccttgccgaaccg
gagcaattggccaaagaacaatggcccttcgacgatgcccgtttgcaggagttgttcttc
cgctatcgtgcgcgaaatttcccggaaactttaaatgtggccgagcgccaacaatgggaa
agcttctgccgcaatcgtttgtcccatgaagaatacggcgcaccgaatactttgccggcc
ttcgaggcggcgctggaggcttgtcggcaagagcagggcggcacattgccggcggtactt
gcggcctggcgcgattacgccgcggaactgcgtcaacgctattcgctggagacttga
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