KEGG   Pseudomonas aeruginosa PA1R: PA1R_gp2867
Entry
PA1R_gp2867       CDS       T02929                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
paer  Pseudomonas aeruginosa PA1R
Pathway
paer02024  Quorum sensing
paer03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PA1R_gp2867
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PA1R_gp2867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paer03019]
    PA1R_gp2867
   03036 Chromosome and associated proteins [BR:paer03036]
    PA1R_gp2867
Messenger RNA biogenesis [BR:paer03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PA1R_gp2867
Chromosome and associated proteins [BR:paer03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PA1R_gp2867
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AHA24593
LinkDB
Position
complement(3191920..3192168)
AA seq 82 aa
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVRLPSGDQPAEPGNA
NT seq 249 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacctcaataccctgcggaaagaacgcgtc
ccggtttccatctatctggtcaacggcatcaagctgcaaggccagatcgagtccttcgac
cagtttgtcatcctgctgaagaacaccgtcagccagatggtttacaagcacgcgatctcc
accgtggtaccgagccgtccggtgcgtctgccgagcggtgaccagccggccgagccgggc
aacgcttga

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