Pseudomonas aeruginosa PA1R: PA1R_gp3965
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Entry
PA1R_gp3965 CDS
T02929
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
paer
Pseudomonas aeruginosa PA1R
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paer03009
]
PA1R_gp3965
Enzymes [BR:
paer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PA1R_gp3965
Ribosome biogenesis [BR:
paer03009
]
Prokaryotic type
rRNA helicases
PA1R_gp3965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHA25683
LinkDB
All DBs
Position
complement(4428175..4429551)
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AA seq
458 aa
AA seq
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MTSTAFSSLPLSADLLANLDSLGYREMTPIQAQSLPLILQGHDLIAQAKTGSGKTAAFGL
ALLSPLNPRYFGCQALVLCPTRELADQVAKEIRRLARAADNIKVLTLCGGVPYGPQVASL
EHGAHVVVGTPGRIQEHLRKGTLVLDGLNTLVLDEADRMLDMGFYDSIAEIIGQLPERRQ
TLLFSATYPDGIEKLAKTFMRDPRQVRVESLHADSQIEQRFFEIDPKQRMDAVVRLLQHF
RPQSSVAFCQTRQQCQELADALKAQRISALALHGDLEQRERDQVLTVFANRSCNVLVATD
VAARGLDIAALETVINVELARDPEVHIHRIGRSGRAGEKGLALSLVAPAEASRAQAIEDL
QKQPLAWYALGQLKASPEPLLPPMSTLCIAGGRKDKVRPGDLLGALTGDAGLPGSAVGKI
AIFDFQAFVAIERGLAHQALKRLSEGKIKGRSFKVRLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccaccgctttctcctcgctgccgctttccgcggacctcctggccaatctcgac
tccctcggttaccgggagatgacgccgatccaggcgcagagcctgccgctgatcctccag
ggccacgacctgatcgcccaggccaagaccggcagcggcaagaccgcggccttcggcctc
gccctgctcagcccgctgaacccgcgctacttcggctgccaggcgctggtgctgtgcccg
acccgcgaactggccgaccaggtcgccaaggagatccgccggctggcccgcgccgccgac
aacatcaaggtcctgaccctctgcggcggcgtcccctacggcccgcaggtggcttcgctg
gagcacggcgcgcacgtggtggtcggcaccccggggcgcatccaggagcacctgcgcaag
ggcaccctggtcctcgacgggctcaataccctggtcctcgacgaagccgaccggatgctc
gacatgggcttctacgacagcatcgccgagatcatcggccagctccccgagcgccggcag
accctgctgttctccgccacctacccggacggcatcgagaagctggcgaagaccttcatg
cgcgatccgcgacaggtgagggtcgagtcgctgcacgccgacagccagatcgagcaacgt
ttcttcgagatcgatccgaaacagcgcatggacgccgtggtacgcctgctccagcatttc
cggccacagtccagcgtggccttctgccagacccgccagcagtgccaggagctggccgac
gcactgaaggcgcagcggatttccgccctggccctgcacggcgacctggagcagcgcgag
cgcgaccaggtcctgacggtgttcgccaaccgcagttgcaacgtactggtggccaccgac
gtggccgcccgcgggctggacatcgccgccctggaaacggtgatcaacgtcgagctggcg
cgtgacccggaggtccacatccatcgcatcggacgcagcggtcgcgccggcgagaaaggc
ctggccctgtcgctggtggcgccggccgaggccagccgcgcgcaggccatcgaggacctg
cagaagcagccgctggcctggtacgccctcggccagttgaaggccagcccggaaccattg
ctgccgccgatgagcaccctgtgcatcgccggcggacgcaaggacaaggtgcgccccggc
gacctgctcggtgccctcaccggcgacgccgggctgcccggcagcgcggtgggcaagatc
gccatcttcgacttccaggccttcgtcgccatcgagcgcggcctcgcccaccaggccctc
aagcgcctgagcgaaggcaagatcaagggtcgctcgttcaaggtccgcctgctttag
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