Pseudomonas aeruginosa PA1R: PA1R_gp4872
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Entry
PA1R_gp4872 CDS
T02929
Name
(GenBank) Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
KO
K22549
D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer00470
D-Amino acid metabolism
paer01100
Metabolic pathways
Module
paer_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PA1R_gp4872
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
HI0933_like
Thi4
NAD_binding_9
DAO
XdhC_C
FAD_binding_3
Pyr_redox_3
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AHA26577
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Position
complement(5433795..5435048)
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AA seq
417 aa
AA seq
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MSADYDLLIVGAGPAGLAAALAAAPSGARIALVDDNPAAGGQIWRDGPRASLPPRAHQMR
QRLAGQANVEHFPATRVVACGPGRRLLLEDPQRGWQVGYRRLVLCTGARELLLPFPGWTL
PGVTGAGGLQALAKGGLPLAGQRLVVAGSGPLLLASAASASHCGARLLHVAEQAPARTLA
AFAVRLPRWPGKLWQAAGLFARSYRADSYVLAALGEERLEAVRLREGGRVREIACERLAC
GFGLVPNVQLGQALGYRLDGPALAVDEWQAGSLPDHYAAGECTGFGGSELALVEGTIAGH
AAVDERDAARRLWPRRRRWQGFADTLARHFALRAELRELAEADTLVCRCEDVPLAALAGH
AGWTEAKLHSRCGMGACQGRICGSAAQFLFGWTPPAPRPPFSPARLETLACWQGDAG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgactacgacctgctgatcgtcggtgccggccccgccggcctggccgcagcg
ctggccgccgcgccgagcggcgcgcgcatcgccctggtcgacgacaacccggccgccggc
ggacagatctggcgcgacggcccgcgtgccagccttccgccgcgtgcccatcagatgcgc
caacgcctggccgggcaggccaatgtcgagcacttcccggcgacccgggtggtcgcctgc
ggtcccggcaggcgcctgttgctggaagacccgcaacgtggctggcaggtcggctaccga
cgcctggtcctctgcaccggcgcccgcgaactgctgctgccttttcccggctggaccctc
cccggcgtcaccggcgccggcggcctgcaggcgttggccaagggcggcctgccactggcc
ggccagcgcctggtggtggccggctccggcccgctgctgctggccagcgccgccagcgcc
agccactgcggggcgcgcctgctgcacgtcgccgaacaggcgccggcgagaaccctggcc
gccttcgccgtacgcctcccgcgctggcccggcaagctgtggcaggccgccggcctgttc
gcccgtagctaccgcgccgacagctacgtgctcgccgccctcggcgaggagcgcctggaa
gccgtgcgcctgcgcgaaggcggtcgggtccgcgagatcgcctgcgaacgcctggcctgc
ggcttcggcctggtgcccaacgtgcaactcggccaggccctcggctatcgcctcgacggc
ccggcgctcgccgtcgacgaatggcaggccggcagcctgcccgaccactacgccgccggc
gaatgcaccggcttcggcggcagcgaactggccctggtggaaggcaccatcgccggccat
gccgccgtcgacgagcgcgacgcggctcgccgcctgtggccacgacggcgacgctggcag
ggcttcgccgacaccctggcgcgacacttcgccctgcgtgccgaactgcgtgaactggcg
gaggcggataccctggtctgccgttgcgaagacgtccccttggccgcgctggccgggcat
gccggctggaccgaggccaagctgcacagccgttgcggcatgggcgcctgccaggggcgg
atatgcggcagcgccgcgcaattcctgttcggctggacgcctccggcgccgcgtccgccg
ttcagcccggcgcgcctggagaccctggcctgctggcagggcgacgccggctag
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