Pseudomonas aeruginosa PA1R: PA1R_gp5037
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Entry
PA1R_gp5037 CDS
T02929
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer02020
Two-component system
paer02025
Biofilm formation - Pseudomonas aeruginosa
paer02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PA1R_gp5037
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PA1R_gp5037
09142 Cell motility
02040 Flagellar assembly
PA1R_gp5037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paer03021
]
PA1R_gp5037
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paer02035
]
PA1R_gp5037
Transcription machinery [BR:
paer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PA1R_gp5037
Bacterial motility proteins [BR:
paer02035
]
Flagellar system
Flagellar assembly proteins
Stator
PA1R_gp5037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
GerE
MarR_2
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AHA26742
LinkDB
All DBs
Position
5606100..5606819
Genome browser
AA seq
239 aa
AA seq
DB search
MYSKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLEAAKKYDAG
KGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVTDAIRAIEARTGRDAKDHEVAA
ELQLSLEDYYGILSDTQGSRLYSFDDLLQDGEHGLPEDTSLSHNEPIHGLLDERFQAALA
DAIAKLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRARLADWRSA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcaaggcgcaagcgcagaactcccaggagcaactgatccagcgttacgcacca
ctggtcaagcgcatcgcctatcacctgctcggccgcctgccggccagcgtgcaggtggag
gacctgatgcaggccggcatgatcggcctgctcgaggccgcgaagaaatacgacgccggc
aagggcgccagcttcgagacctatgccggcatccgcatccgcggggccatgctcgacgag
gtccgcaagggcgactgggcgccgcgttcggtgcaccgcaacacgcgcatggtgaccgac
gcgatccgcgcgatcgaggcgagaaccgggcgcgacgctaaagatcacgaagttgctgcc
gaactccaattgagcctcgaagattactacggcatcctcagcgacacgcagggcagccgc
ctgtacagcttcgacgacctgttgcaggacggcgaacatggattgccggaagacaccagc
ctcagtcacaacgaaccgatccacggcctgctcgacgaacgtttccaggcggccctggcg
gatgccatcgccaagttgccggagcgcgagcgcctggtgctggcgttgtattacgacgag
gaactcaacctcaaggagatcggcgaggtactgggcgtcagcgaatcgcgggtcagccag
ttgcacagccagtgcgccgcgcgtttgcgcgcgcgcctggccgattggcggtcggcctga
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integrated database retrieval system
