KEGG   Pseudomonas aeruginosa PA1R: PA1R_gp5296
Entry
PA1R_gp5296       CDS       T02929                                 
Name
(GenBank) Type III secretion inner membrane protein (YscD, flagellar export components)
  KO
K03220  type III secretion protein D
Organism
paer  Pseudomonas aeruginosa PA1R
Brite
KEGG Orthology (KO) [BR:paer00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paer02044]
    PA1R_gp5296
Secretion system [BR:paer02044]
 Type III secretion system
  Type III secretion core apparatus
   PA1R_gp5296
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Yop-YscD_cpl Yop-YscD_ppl_3rd Yop-YscD_ppl_1st Y4YQ_C T2SSB
Other DBs
NCBI-ProteinID: AHA27001
LinkDB
Position
5882534..5883832
AA seq 432 aa
MAWKIRFYSGLNQGAEVSLGEGRVALGSDPLQADLVLLDEGIAAVHLVLEVDAQGVRLLE
WAEGCEPRQDGQAQVAGAILQALAGQTCGPLRWAFCDPQRSFPERFPEAEVQTAPVRRKS
SARAGGAWLLGVSLALALCLLGMLVEPWSARQHGMAGEEPLAKVRAYLREQGMSEVDVQR
QGDSLLLGGYLEDNARRLALQRYLDGSGVDYRLEARSMEDIRQGVDFILQKFGYRQILSS
NADKPGWVRLNGELAEQDERWARIDALLESEVPGLLGVENQVRVAGSHLRRLERLLADAG
LDRQLSFRERGERIELSGTLDEVQLSAFYRLQREFQQEFGNRPSLELLSRGKRASGDELE
FTIRSVSLGRVPYVVLGDGQKYPVGASTSRGVRILAIEPESILVARGKQRFIINLKGEVL
HDDSLGNATVGR
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcctggaagatccgcttctacagcgggctgaaccagggcgccgaagtctcgctcgga
gagggccgggtggcgcttggcagcgatccgttgcaggccgacctggtgttgctcgacgag
ggcatcgcggcagtccacctggtgctcgaggtcgatgcccagggcgtgcgcctgctggaa
tgggcggagggctgcgagcctcgccaggacggccaggcgcaagtcgccggagcgatcctg
caggcgcttgccgggcagacctgcggcccgctgcgctgggcattctgcgacccgcagcgg
agttttcccgagcgtttccccgaagccgaggtgcagaccgcgccagtgcgccgcaagtcg
tccgcccgtgccggcggggcctggctgctcggcgtcagcctggcgctggcgctgtgtctg
ctgggcatgctcgtcgaaccctggtcggcccgccagcacggcatggccggcgaggagccc
ctggcgaaggtgcgcgcctacctgcgcgagcagggcatgagcgaggtggatgtgcagcgc
cagggcgacagtctcctgctcggcggctacctggaggacaacgcccggcgcctggcgcta
cagcgctacctcgatggcagcggcgtggactaccgactggaagcacggagcatggaagac
attcgccagggcgtggatttcatcctgcagaaattcggctatcggcagatcctcagcagc
aacgcggacaagcctggctgggtccggctcaacggcgaactggcggaacaggacgaacgc
tgggcgcggatcgacgcattgctggagtccgaggtgccgggcctgctcggggtggaaaac
caggtccgggtggccggctcgcacctgcgccgcctcgagcgcctgctggcggacgccggc
ctcgaccggcaactgagtttccgcgagcgcggcgaacgcatcgagttgagcggcacgctc
gacgaggtccagctcagcgccttctaccgcctgcagcgcgagttccagcaggaattcggc
aaccgcccgagcctggagctgctcagtcgcggcaagcgcgccagcggcgacgaactggag
ttcacgattcgctcggtgtcgctggggcgggtgccctatgtagtgctcggcgacggccag
aaatacccggtgggcgcctcgacatcccgcggtgtgcgaatcctcgccatcgagccggag
tcgatcctggtggcccgcggcaagcagcgtttcatcatcaatctcaaaggggaggtgctc
catgatgacagccttggaaacgcgactgtcggtcgctga

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