Pseudomonas aeruginosa PA1R: PA1R_gp5305
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Entry
PA1R_gp5305 CDS
T02929
Name
(GenBank) GGDEF domain protein
KO
K21023
diguanylate cyclase [EC:
2.7.7.65
]
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PA1R_gp5305
Enzymes [BR:
paer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PA1R_gp5305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
MHYT
GGDEF
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AHA27010
LinkDB
All DBs
Position
complement(5889937..5891994)
Genome browser
AA seq
685 aa
AA seq
DB search
MLISSYNQVLVAFSLIVAILASYTALDMAGRVTLAKGREALSWLIGGAFAMGFGIWSMHF
VGMLAFSLPIPLGYDLGLTLLSLLLAVGSSAFALWLVCQAELPWQRLALGALLMGSGIAA
MHYTGMAALLMMPGIVYDPLWLGLSILIAVIASGAALWIAFRLRHGSRRIVLVRAGAALV
MGCAIVGMHYTGMAAAQFPLGSFCGAAGRGIDNGWLAVLVIVITLAVIAIALIVSVLDSR
LEARTSVLATSLARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFM
DLDGFKAVNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIEAREPADAAT
LAEKLVKRISQPYQISRHEVRISASIGIALYPGDGQTRHELMINADAAMYHAKDQGRNGY
CFFESSMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMVGVEALLRWEHPQHG
LITPGQFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHAEWNIAVNLSALQFAHAGLV
DSVRNALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGYSSLL
YLKRLPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTR
LGCNSLQGFLLGRPMPAEQLLASVA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcagcagctacaaccaggttcttgtcgccttttccctgattgtggccatcctg
gcgtcctacaccgctctcgacatggccggccgggtgaccctggcgaaaggccgcgaggcg
ctctcctggctgatcggcggcgctttcgccatgggcttcggcatctggtcgatgcatttc
gtcggcatgctcgccttcagcctgccgatcccgctcggctacgacctgggcctgaccctg
ctgtcgctgctactggccgtcggcagttcggccttcgccctctggctggtgtgccaggcg
gaactcccctggcaacgcctggcgctgggcgccctgctgatgggcagcggcatcgccgcc
atgcactacaccgggatggccgccctgctgatgatgccggggatcgtctacgacccgctg
tggctcggcctctccatcctgatcgcggtgatcgcctccggcgccgcgctgtggatcgcc
ttccgcctgcgccatggcagccggcgcatcgtcctggtccgggccggcgccgccctggtg
atgggctgcgccatcgtcggcatgcactacaccgggatggccgccgcgcagttccccctg
ggcagcttctgcggcgccgccggccgaggcatcgacaacggctggctggcggtgctggtc
atcgtgatcaccctggcggtgatcgccatcgccctgatcgtctcggtgctggactcgcgc
ctcgaggcacgtacctcggtgctcgccacctccctcgcacgagccaaccgcgagctgatc
cagttggccctgcacgacaacctgaccaagctgcccaaccgcatgctcctcgacgaccgc
ctggagcaggcgatccagcaggcgatccgcgacgatcgccggttcgccgtgctgttcatg
gacctggacggcttcaaggcggtcaacgatgcttacggccatcacctcggcgacctgttg
ctgatcgaagtcgccgagcgtatccgcgccaacgtccgcgcccaggacaccatcgcccgc
ctcggcggcgacgagttcgtcctgctgatcgaggcccgagagcccgccgacgccgcgacc
ctggccgagaagctggtgaagcggatcagccagccgtaccagatatcccgccacgaggtg
cggatctcggcgagcatcggcatcgcgctctaccccggcgacgggcagacccgccacgaa
ctgatgatcaatgccgacgcggcgatgtatcacgccaaggaccagggacggaacggctac
tgcttcttcgagagttcgatgaacgccaacgcccaggaacagttgcaactactgcatgac
ctgcgccaggccctggagcgccggcagttggtcttgcactaccaacccaaggtactggcg
ccgaacggaccgatggtcggcgtggaagcgctgctgcgctgggagcatccgcaacacggg
ctgatcacccccggccagttcctgccgctggcggaaaagaccggcctgatcgtgcagatc
ggcgagtgggtgctcgacgaagcctgccggcagatgcgcctctggctggacggcgggcat
gcggagtggaacatcgcggtgaacctttcggccctgcagttcgcccatgccggcctggtc
gactcggtgcgcaacgcactcctgcgccacagcctggagcccagccacctgatcctcgag
gtgaccgaatcgaccgccatgcgcgatgccgatgccagcctggtgatcctcgagcagttg
tcggcgatgggcgtcggcatctccatcgacgacttcggcaccggctactccagcctgctc
tatctcaagcgcctgccggcgagcgaactgaagatcgaccgtggcttcatcaacgagctg
gcccacgacagcgacgacgccgcgatcgtctcggcgatcgtcgccctcggccgcacgctg
aacctgaagatcgtcgccgagggcgtggaaaccgaggcccagcaggagttcctgacccgc
ctcggctgcaattcgctgcaaggcttcctgctcggcaggccgatgccggccgagcagttg
ctcgccagcgtcgcctga
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