KEGG   Pseudomonas aeruginosa PA1R: PA1R_gp5628
Entry
PA1R_gp5628       CDS       T02929                                 
Name
(GenBank) Ku domain protein
  KO
K10979  DNA end-binding protein Ku
Organism
paer  Pseudomonas aeruginosa PA1R
Pathway
paer03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:paer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PA1R_gp5628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paer03400]
    PA1R_gp5628
DNA repair and recombination proteins [BR:paer03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PA1R_gp5628
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AHA27328
LinkDB
Position
6237422..6238303
AA seq 293 aa
MARAIWKGAISFGLVHIPVSLSAATSSQGIDFDWLDQRSMEPVGYKRVNKVTGKEIEREN
IVKGVEYEKGRYVVLSEEEIRAAHPKSTQTIEIFAFVDSQEIPLQHFDTPYYLAPDRRGG
KVYALLRETLERTGKVALANVVLHTRQHLALLRPLQDALVLITLRWPSQVRSLDGLELDE
SVTEAKLDKRELEMAKRLVEDMASHWEPDEYKDSFSDKIMKLVEEKAAKGQLHAVEEEEE
VAGKGADIIDLTDLLKRSLRSRAGGGKDKGSEKAGADAKGRAKSGASRSRRKA
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcgcgtgcgatctggaaaggcgcgatcagcttcggcctggtgcatataccggtgagc
ctgtcggcggcgacctcgtcgcagggcatcgatttcgactggctcgaccagcgcagcatg
gagccggtcggctacaaacgggtgaacaaggtcaccggcaaggagatcgagcgcgagaac
atcgtcaagggcgtggagtacgaaaagggccgctacgtggtgctgagcgaggaagaaatc
cgcgcggcgcatcccaagtcgacccagaccatcgagatcttcgctttcgtcgatagccag
gaaattcccctgcagcacttcgataccccgtactacctggcccccgaccggcgcggaggc
aaggtctacgcgctgctccgggagaccctggagcgcaccggcaaggtcgccctggccaac
gtcgtcctgcacacccgccagcacctggcgctcctgcggcctctgcaggacgccctggtg
ctgatcaccctgcgctggccgtcgcaggtgcgcagcctggatggcctggagctggacgaa
agcgtcaccgaggcgaaactcgacaagcgcgagctggagatggccaagcgcctggtggag
gacatggcctcccactgggagccggacgaatacaaggacagcttcagcgacaagatcatg
aagctggtcgaggaaaaggccgccaagggccagctgcacgcggtggaggaagaggaggag
gtggctggcaagggcgccgacatcatcgatctcaccgacctgctcaagcgcagcctgcgt
tcccgcgccggcggcggcaaggacaagggcagcgaaaaggccggggccgacgcgaagggt
cgcgccaagtccggtgcctcgcgttcgcggcgcaaggcctga

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