Pseudomonas aeruginosa SCV20265: SCV20265_0226
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Entry
SCV20265_0226 CDS
T02971
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCV20265_0226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paes02000
]
SCV20265_0226
Transporters [BR:
paes02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SCV20265_0226
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AHC74340
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All DBs
Position
245742..246899
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AA seq
385 aa
AA seq
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MRRLATARGTVSASGRQLPQQHHNNANRLWECSMFKSLHQYAHVFSRLSLFVLAFAAAAQ
AQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDV
VEVESPELLRGCDEGLFERLDPARFGDPAQFVPGTFSECGVATYVWSMVMAYDSTKLARA
PQSWADFWNVREFPGKRGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQ
LKPNIQWWEAGAQPPQWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWPGSLYDPEYWAVV
KGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGA
RAVDAEFWVDHGEELEQRFNAWAAR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcctggcgaccgcgcgcggaaccgtttcggcctctggccggcaactgcctcag
caacatcacaacaatgccaatcggctgtgggagtgttccatgttcaagtccttgcaccag
tacgcacacgtgttttcccggttgtccctgttcgtcctggcgttcgccgcggcggcccag
gcgcagagccagagcctgacggtgatctccttcggcggcgcgaccaaggccgcccaggaa
caggcctatttcaaacccttcgagcgaagcggcggcgggcaggtggtcgccggcgaatac
aacggcgaaatggccaaggtgaaggccatggtcgacgtcggcaaggtcagctgggacgtg
gtcgaggtggagagccccgaactgctccgcggctgcgacgaggggctgttcgaacgcctc
gacccggcgcgtttcggcgaccccgcgcagttcgtccccggcactttcagcgagtgcggg
gtggccacctacgtctggtcgatggtgatggcctacgactcgacgaagctggccagggcg
ccgcagtcctgggcggatttctggaacgtccgcgagttccccggcaagcgtggcctgcgc
aagggcgccaagtacaccctggaagtggcgttgctggccgacggggtgaaggcggaggac
ctctacaaggtactcgccaccccggagggggtcagccgcgccttcgccaagctcgaccag
ctcaagccgaacatccagtggtgggaggccggcgcccagccgccgcaatggctggcggcc
ggcgacgtggtgatgagcgcggcctacaacgggcgcatcgccgctgcgcagaaggagggg
gtgaaactggccatcgtctggcccggcagtctctacgatccggagtactgggcggtggtg
aagggcacgccgaacaaggcgctggcggagaaattcatcgccttcgccagccagccgcag
acgcagaaggtgttctccgagcagatcccctacgggccggtacacaagggcaccctggcg
ttgctgccgaagacggtgcaggaggcgctgccgaccgcgccggccaacctcgaaggcgcg
cgggcggtggatgccgagttctgggtggaccacggcgaggagctggaacagcgtttcaat
gcctgggcggcgcgctga
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