Pseudomonas aeruginosa SCV20265: SCV20265_0372
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Entry
SCV20265_0372 CDS
T02971
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCV20265_0372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paes03400
]
SCV20265_0372
Enzymes [BR:
paes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SCV20265_0372
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCV20265_0372
DNA repair and recombination proteins [BR:
paes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCV20265_0372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AHC74486
LinkDB
All DBs
Position
400996..401808
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LLGAEAGTLISHLGMSGSLRLVESGTPASRHEHVDIELASGMALRYTDPRRFGAMLWSLA
PLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRKPAGSISKARYLRLAEEIKRILAIAIERGGTTLRDFVGGDGQPGYFQQELFVYGR
GGEFCKVCGSTLREIRLGQRASVYCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactacccgaagtcgaaaccacccgccggggcatcgccccctacctcgaaggc
cagcgcgtcgagcgcgtgatcgtgcgcgagcggcgcctgcgctggccgattcccgaagac
ctggacgtgcgcctgtccggacaacgcatcgtcagcgtcgagcgccgcgccaagtacctg
ctgctgggcgccgaggccggtacgctgatcagccacctgggcatgtccggcagcctgagg
ctggtggagagcggcaccccggccagtcgccacgagcacgtcgacatcgagctggcctcg
ggcatggccctgcgctacaccgatccgcggcgcttcggcgccatgctctggagcctggcg
ccactggaacacgagctgctgcgcaacctcggcccggaaccgctgaccgacgctttcgcc
ggccagcgtctgttcgagctgtcgcgcgggcggagcatggcggtcaagccgttcatcatg
gacaacgcggtggtggtcggggtcggcaacatctacgccagcgaagcgctgttcgccgcc
ggcatcgatccgcgcaagcccgccgggagcatctccaaggcgcgctacctgcgcctggcg
gaggagatcaagcggatcctggcgatcgccatcgagcgcggcggcaccaccctgcgcgat
ttcgtcggcggcgacggccagcccggttacttccagcaggaattgttcgtctatggccgt
ggcggggagttctgcaaggtctgcggcagcaccctgcgcgagatccgcctaggccagcgc
gccagcgtgtactgcccgcgctgccaacgctga
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