Pseudomonas aeruginosa SCV20265: SCV20265_0954
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Entry
SCV20265_0954 CDS
T02971
Name
(GenBank) Sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
paes
Pseudomonas aeruginosa SCV20265
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paes03000
]
SCV20265_0954
Transcription factors [BR:
paes03000
]
Prokaryotic type
Helix-turn-helix
Other families
SCV20265_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
PAS_4
Diguanyl_cycl_sensor
HTH_20
HTH_23
AAA_5
PAS_9
HTH_7
PAS_8
HTH_22
HTH_30
HTH_AraC
HTH_50
PAS
HTH_17
HTH_28
Mg_chelatase
HVO_A0261_N
PAS_7
AAA_2
HTH_29
HTH_10
IclR_C
HTH_IclR
HTH_Tnp_ISL3
HTH_Tnp_1_2
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AHC75068
LinkDB
All DBs
Position
997361..999292
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AA seq
643 aa
AA seq
DB search
MPASSMSRHARQVLTVAQGKIPPGGPATDPSIARSWLRCLEQHHLDPGQPMAPMVLEHAR
MLERRERLQQVLEIADGEMHSLYQQLSGNDHAVLLTDARGVILNCVNADAQRQTFEHAGL
WLGADWSEPCEGTNGIGTCVVERQALTIQQEEHFRSRHTGLTCSASPVFDPQGELMAVLD
VSSARQEVSRQSQFHTMALVNLSAKIIEGCYFLRRFEGSWLLRFHVQGDYVGLFSEGLLA
FEEDGRIRAVNQSALNLLGCPRQRLLGQPVETFFDCRLDDLLGRASPQPSASWPLRTREG
RTLYAMLRGAPRAIPQALAVPTAAKPAPAAPGLCLGDAELAADFRRALKVYARDVPLLLN
GETGSGKEAFAKAVHLAGPRAEQAFVALNCAAIPETLIESELFGYRGGSFTGARKEGMRG
KLQQADGGTLFLDEIGDMPLALQTRLLRVLEERRVVPLGGEPEDVDVRLISATHRDLAGL
VADGRFREDLYYRLNGMVVSLPPLRERSDREELLDYLLAEEARGQRIQLDGEVRQGLLAY
RWPGNVRQMRTVLRTLVALCEDGRVGLRDLPADIRQALAALPPAAAAPAPAAGNSLDDAE
RAALLAALDGQRWHVSRVAEQLGISRNTLYRKLRRHGLVRGQA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccagttccatgagccgccacgcgcggcaagtgctgaccgtcgcccagggcaag
atcccgccgggcggccctgcgaccgatccgtccatcgcccgctcctggctgcgctgcctg
gaacagcaccatctcgatcccggccagccgatggcgccgatggtgctggagcacgcgcgc
atgctcgaacgccgcgagcgcctgcaacaggtgctggagatcgccgatggcgagatgcac
agcctctatcagcagctttccggcaacgaccacgcggtactgctcaccgatgcccgcggg
gtgatcctcaattgcgtcaacgccgacgcccagcgccagaccttcgaacacgccggcctc
tggctcggcgccgactggagcgagccctgcgaaggcaccaacggcatcggcacctgcgtg
gtcgagcggcaggccctgaccatccagcaggaagagcacttccgtagccgccacaccggc
ctgacctgctcggcgagcccggtgttcgatccgcagggcgagctgatggcggtgctcgac
gtgtcttcggcgcgccaggaagtctcgcggcagagccagttccacaccatggcgctggtc
aacctgtcggcgaagatcatcgagggctgctatttcctccgtcgcttcgagggctcctgg
ctgctgcgcttccatgtccagggcgactatgtcggcctgttcagcgaagggctgctggcc
ttcgaggaagacgggcggatccgcgcggtgaaccagagcgcgctgaacctgctcggttgt
ccgcgccagcgcctgctcggccagccggtggagaccttcttcgattgccgtctcgacgac
ctgctcggtcgcgcctcgccgcaacccagcgccagctggccgctgcgcacccgcgaggga
cggaccctgtacgccatgctgcgcggcgcgccgcgggcgataccccaggccctggcggtg
cccacggcagcgaagccggcgcctgccgcgcccggcctgtgcctgggcgacgccgagctg
gccgccgatttccgccgggcgctgaaggtctacgcgcgcgacgtgccgctgctgctcaac
ggcgagaccggttccggcaaggaggccttcgccaaggccgtgcacctggccggcccgcgc
gcggaacaggcgttcgtcgcgctgaactgcgcggcgatcccggaaaccctgatcgagagc
gaactgttcggttatcgcggcggcagcttcaccggcgcgcgcaaggagggcatgcgcggc
aagttgcagcaggccgacggcggcaccctgttcctcgacgagatcggcgacatgccgctg
gccttgcagacccgcctgctgcgggtgctggaagagcgccgggtagtaccgctgggcggc
gagccggaggatgtcgacgtgcgcctgatcagcgctacccaccgcgacctggccgggctg
gtcgccgatggacgcttccgcgaggatctctactatcgcctcaatggcatggtcgtgagc
ctgccgccgctgcgcgagcgcagcgaccgcgaggagttgctggactacctgctggccgag
gaagccaggggccagcgcatccagctcgacggcgaggttcgccagggcctgctggcctac
cgctggccgggcaacgtccggcagatgcgcacggtgctgcggaccctggtggcactctgc
gaggacggccgggtcggcctgcgcgacctgcccgcggatatccgccaggccctggcggcg
ctgccgcccgctgcagcggcgcccgccccggccgcgggcaacagcctggacgacgccgag
cgagccgcgttgctggcggcgctggacggccagcgctggcacgtgagccgggtggccgag
caactggggatcagccgcaacaccctgtatcgcaagctgcgccggcacggcctggtgcgc
ggccaggcctga
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