Pseudomonas aeruginosa SCV20265: SCV20265_1516
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Entry
SCV20265_1516 CDS
T02971
Name
(GenBank) Alginate lyase precursor
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes00051
Fructose and mannose metabolism
paes01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
SCV20265_1516
Enzymes [BR:
paes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
SCV20265_1516
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GFIT
Motif
Pfam:
Alginate_lyase
DUF3379
WIR1
Motif
Other DBs
NCBI-ProteinID:
AHC75630
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All DBs
Position
complement(1589773..1590876)
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AA seq
367 aa
AA seq
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MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGS
LVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRSGRDGDLACALN
WMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSSSRPLAAHAEQSREIEDWF
ARLGTQVVRDWSGLPLKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQ
GFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGVDLRQENHGALQRLAERVMKGVDDE
ETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRV
FSREGGS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtcccacctgatccgtatcgccctgcccggtgccctcgccgcggcattgctc
gccagccaagtcagccaggccgccgacctggtacccccgcccggctactacgcggcggtc
ggcgagcgcaagggcagcgccggcagctgccccgcggtgccgccgccgtataccggcagc
ctggtcttcaccagcaagtacgaaggctccgattcggcgcgggcgaccctcaacgtcaag
gcggagaagaccttccgctcgcagatcaaggacatcaccgacatggagcgcggcgctacc
aagctggtcacccagtacatgcgcagcggccgcgacggcgacctggcctgcgcactgaac
tggatgagcgcctgggcccgcgccggcgccctgcagagcgacgacttcaaccacaccggc
aagtccatgcgcaaatgggcgctgggcagcctctccggcgcctacatgcgcctgaagttc
tccagctcgcggccgctcgcggcccacgccgagcagagccgggaaatcgaggactggttc
gcccggctcggcacccaggtagtccgcgactggagcggcctgccgctgaagaagatcaac
aaccattcctactgggcggcctggtcggtgatgtccaccgcggtggtgaccaaccgccgc
gacctcttcgactgggcggtgagcgagttcaaggtcgccgccaaccaggtcgacgagcag
ggcttcctgcccaacgaactcaagcgccgccagcgcgccctcgcctaccacaactatgcg
ctgccaccgctggcgatgatcgccgcgttcgcccaggtcaacggcgtcgacctgcgccag
gagaaccacggcgccctgcagcgcctggccgagcgggtgatgaagggagtcgacgacgag
gaaaccttcgaggagaagaccggcgaggaccaggacatgaccgacctcaaggtcgacaac
aagtacgcctggctggagccctactgcgccctctaccgctgcgagccgaagatgctcgag
gcgaagaaggaccgcgagccgttcaacagtttccgcctcggcggcgaagtgacgcgggtg
ttcagccgcgaagggggaagttga
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