Pseudomonas aeruginosa SCV20265: SCV20265_2139
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Entry
SCV20265_2139 CDS
T02971
Name
(GenBank) Type IV secretion system protein VirD4
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCV20265_2139
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
AHC76253
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Position
2262397..2264403
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AA seq
668 aa
AA seq
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MQAQGVLFGQIAAVFGIVIAGVWGATQWTAAALGYQLRLGAPWFDFHGTPVYYPWKLFEW
WFFFDAYAPQVFDTGGMIAASSGLLAVVVAIAMSVWRSRQARKVTTYGSARWADVADIRK
AGLTQPAGVFLGQHDGHYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKG
ENWQITAGWRSRFSHCLLFNPTDASSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPASPFELTLHRMMTTKHLGDVQ
HPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIASEHPVS
LYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIQRRHKLLLMLDEFPALGRLDFF
ETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPTDEAVVMVSSVAPIKA
KKLRYFADANFKQRVLPPPSVTAGRYADVPPARPDDWSGLAIPAVPATPATASADDLEAL
GSTDDGGPRRQPELSEAIAYAPEMDAPSSDLSLLDDDDMPPVLPGQIDPALQRTARLASL
DPNDGIDL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcagggcgtgttgttcgggcagatcgccgccgtcttcggcatcgtgatcgcc
ggtgtgtggggtgccacgcaatggaccgccgccgccttgggctaccagctacgcctgggc
gcgccctggttcgacttccacggcacgccggtctattacccgtggaagctgttcgagtgg
tggttcttcttcgacgcctacgcgccgcaggtgttcgacaccggcggcatgatcgcggcg
agcagcggcctgctggccgtggtggtcgccatcgccatgtcggtgtggcgctcgcgccag
gcgcgcaaagtgacgacctatggctcggcccgctgggccgatgtcgccgacattcgcaag
gccgggctgacgcagcccgccggcgtctttctcggccagcatgacggccactacctgcgg
cacgaagggccggaacacgtcctgacctttgcgcccacgcgctcgggcaagggtgtgggc
ctggtggtgccgacgctgctgtcctggccggcatccgccgtcatccacgacatcaagggc
gagaactggcagatcaccgctggctggcgttcgcgcttctcgcattgcctgctgttcaac
ccgaccgatgccagttcggcggcctacaacccgctgctggaagtgcggcgcggcgcgcat
gaggtgcgcgacgtgcagaacatcgccgacatcctggtcgatcccgaaggtgcgctggag
aagcgcaaccactgggagaagaccagtcacgcgctgctggtcggtgccatcctgcatgtg
ttgtacgcgggcgaagacaagacgctgcgtggcgtcgccaactttctcagcgatccagcc
agcccgttcgagctgacattgcaccggatgatgacgaccaagcacttgggtgatgtgcag
catccggttgtcgcctccgccgcccgcgaagtgctcaacaagagcgacaacgagcgctcg
ggcgtgctctccactgccatgtcgttcctcggcctgtaccgcgatccgaccgtggccgaa
gtcacctcgcgttgcgactggcgcattgccgacctgatcgcttcagagcatcccgtctcg
ctgtatctggtagtgccgccttctgacatttcgcgcaccaaaccgctgatccggctgatc
ctcaaccaaatcggacgacggctcaccgaatcgctggatggcagtgatggcatccaacgc
cgccacaagctgctgttgatgctcgatgagttcccggcgctgggccgtctggacttcttc
gagaccgcgctggccttcatggcgggctatggcatccgcagcttcctcatcgcgcagtcg
ctcaaccagatcgacaaggcatatgggcagaaccattcgatcctggacaactgccatgtg
cgcgtgaccttcgctaccaacgacgaacgaacggccaaacgcatttctgaaaccctcggc
accgccactgaactgcgcgcccagcgcaactatgccggacacagattggccccatggctc
ggccacctgatggtgtcgcggcaggaaaccgcacggccactgcttacgccgggcgaagtg
atgcaactgccgaccgatgaagcggtggtgatggtgtccagtgtcgcgccgatcaaggcg
aagaagctgcgctatttcgccgatgccaatttcaagcagcgggtattaccgccgccttcg
gtgacggctggccgctatgccgatgtgccgccggcacggcctgacgactggagcggcttg
gcaatacctgcggttcccgcgacaccggccacggcgtccgccgatgacctggaggccttg
ggttcgaccgacgatggcggcccacgccgccagcccgaactgtccgaagccatcgcctat
gcccccgagatggatgccccgagcagcgacctgtcgctgctcgatgacgacgacatgccc
ccggtgcttcccggccagatcgaccccgccctgcaacgcacggcgcgactggcttctctc
gaccccaacgacggaatcgacctatga
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