Pseudomonas aeruginosa SCV20265: SCV20265_2548
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Entry
SCV20265_2548 CDS
T02971
Name
(GenBank) Outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes01501
beta-Lactam resistance
paes02020
Two-component system
Module
paes_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCV20265_2548
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCV20265_2548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paes02000
]
SCV20265_2548
01504 Antimicrobial resistance genes [BR:
paes01504
]
SCV20265_2548
Transporters [BR:
paes02000
]
Other transporters
Pores ion channels [TC:
1
]
SCV20265_2548
Antimicrobial resistance genes [BR:
paes01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
SCV20265_2548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AHC76662
LinkDB
All DBs
Position
complement(2642967..2644274)
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AA seq
435 aa
AA seq
DB search
MIRVRPVGRLALFLALGGTSPCHAATEEAKAPDYLEWRLLNRNYFLYNDYRRADAGRGYR
KEWAHGLIADLESAYTPGRVGFGLDLHGFAGFKLDGGRGHAGTGLLPLDSSGDNASEYSD
AGAALKLRLGESLLKVGEMTVETPVFDTSDKRLQPQYARGFFLQSDDLDRVRIQAGRFTA
FKEQASSSGHGDFDGYGASTAGSAIGFAGASLAASDNLSGSLFAAQLDNVWRQVYLNMNL
QRAAFSLDGNLYRTRDQGRSRAGAIDTLAYSLQLKYRVGAQGFSLAYQRVHGDTPFDFVG
GDSIYLANSIKYADFNGPGERSWQARYDLDLAPFGLPGLSFMARYVSGRAIDGSHAPAGG
AYNPLGADGRYRPLQGSGGKHWERDLDLRYLFASGPFKDLSLNVSHLSHRANAAQAGDDI
DRLYLIVEYPLKGSL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgttcgaccggtcggccgcctggcccttttcctggcgctgggcggcacctcg
ccgtgccacgccgcgacagaggaagccaaggcacccgactacctggagtggcgcctgctc
aaccgcaactacttcctctacaacgactatcgccgcgcggacgccgggcgcggctaccgc
aaggaatgggcacacggcctgatcgccgacctggagtcggcctatactcccggccgcgtc
ggtttcggcctcgatctccacggcttcgccggcttcaagctcgacggcggacgtggccat
gccggcaccggcctgttgccgctggactcatccggcgataacgccagcgagtattccgac
gccggcgccgcactcaagctgcggctcggcgagagcctgctcaaggtcggcgagatgacc
gtcgagaccccggtcttcgataccagcgacaagcgcctgcaaccccagtacgccaggggc
ttcttcctgcagagcgacgacctcgaccgcgtgcggatccaggccgggcgcttcaccgcc
ttcaaggaacaggcctccagctccggccatggcgacttcgacggctacggcgcgagcacc
gccggcagcgccatcggcttcgccggcgccagcctggcggccagcgacaacctgagcggc
tcgctgttcgccgcgcaactggacaacgtctggcgccaggtctatctcaacatgaacctg
caacgtgccgcgttcagcctggatggcaacctctatcgcacgcgcgaccagggccgcagc
cgggccggcgcgatcgacaccctggcctacagcctgcaactgaagtaccgcgtcggcgcg
cagggtttctccctggcctaccagcgtgtccatggggatacgccgttcgacttcgtcgga
ggtgactccatctacctcgccaactcgatcaagtacgccgatttcaacggtcccggcgaa
cgctcctggcaggcccgctacgacctcgacctggccccgttcggcctgccggggctgagc
ttcatggcgcgttacgtcagcggccgcgccatcgacggcagccatgcgccggccggcggc
gcctacaacccgctgggcgccgatggccgctaccggcccttgcagggcagcggcggcaag
cactgggagcgcgacctcgacctgcgctacctgttcgcctcgggcccgttcaaggacctc
tcgctgaacgtctcgcacctcagccaccgggccaacgcggcccaggccggcgacgacatc
gaccgcctctacctgatcgtcgaatacccactcaaaggctcgctctga
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