Pseudomonas aeruginosa SCV20265: SCV20265_3967
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Entry
SCV20265_3967 CDS
T02971
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes02020
Two-component system
paes02025
Biofilm formation - Pseudomonas aeruginosa
paes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCV20265_3967
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
SCV20265_3967
09142 Cell motility
02040 Flagellar assembly
SCV20265_3967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paes03021
]
SCV20265_3967
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paes02035
]
SCV20265_3967
Transcription machinery [BR:
paes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCV20265_3967
Bacterial motility proteins [BR:
paes02035
]
Flagellar system
Flagellar assembly proteins
Stator
SCV20265_3967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
GerE
MarR_2
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AHC78077
LinkDB
All DBs
Position
complement(4225154..4225873)
Genome browser
AA seq
239 aa
AA seq
DB search
MYSKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLEAAKKYDAG
KGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVTDAIRAIEARTGRDAKDHEVAA
ELQLSLEDYYGILSDTQGSRLYSFDDLLQDGEHGLPEDTSLSHNEPIHGLLDERFQAALA
DAIAKLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRARLADWRSA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcaaggcgcaagcgcagaactcccaggagcaactgatccagcgttacgcacca
ctggtcaagcgcatcgcctatcacctgctcggccgcctgccggccagcgtgcaggtggag
gacctgatgcaggccggcatgatcggcctgctcgaggccgcgaagaaatacgacgccggc
aagggcgccagcttcgagacctatgccggcatccgcatccgtggggccatgctcgacgag
gtccgcaagggcgactgggcgccgcgttcggtgcaccgcaacacgcgcatggtgaccgac
gcgatccgcgcgatcgaggcgagaaccggacgcgacgctaaagatcacgaagttgctgcc
gaactccaattgagcctcgaagattactacggcatcctcagcgacacgcagggcagccgc
ctgtacagcttcgacgacctgttgcaggacggcgaacatggattgccggaagacaccagc
ctcagtcacaacgaaccgatccacggcctgctcgacgaacgtttccaggcggccctggcg
gatgccatcgccaagttgccggagcgcgagcgcctggtgctggcgttgtattacgacgag
gaactcaacctcaaggagatcggcgaggtactgggcgtcagcgaatcgcgggtcagccag
ttgcacagccagtgcgccgcgcgtttgcgcgcgcgcctggccgattggcggtcggcctga
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integrated database retrieval system
