Pseudomonas aeruginosa SCV20265: SCV20265_4477
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Entry
SCV20265_4477 CDS
T02971
Name
(GenBank) DNA topoisomerase III in PFGI-1-like cluster
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paes
Pseudomonas aeruginosa SCV20265
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paes03032
]
SCV20265_4477
03400 DNA repair and recombination proteins [BR:
paes03400
]
SCV20265_4477
Enzymes [BR:
paes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCV20265_4477
DNA replication proteins [BR:
paes03032
]
Prokaryotic type
DNA Topoisomerases
SCV20265_4477
DNA repair and recombination proteins [BR:
paes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCV20265_4477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_recom
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AHC78585
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All DBs
Position
4743786..4745561
Genome browser
AA seq
591 aa
AA seq
DB search
MLTVGVGQDFKPHYQILSGKEKTVARLKELRQKAVEVYVASDPDREGESIGWHILQAAGI
KNYKRVAFKEITKSCISAELSSPRRLDLPKVASQECRRVIDRLVGYLVTPELRRVMGRPT
TAGRVQSVAVYLVVLREREIRAFTAIKHFGVELAFVSPSDGRTWKAEWDPVPTFASKEFP
YVQDRQLAELVGAIRNVIVETCIDGEETDTPPAPFISSSLQMAAGNALKWSPDKTMKIAQ
RLYEQGLITYHRTDNPNISKDSMSDIRAVAKALGLKCVEQQRMFKADQDAQEGHPAITPT
DWTAATAGETADEQALYQLIRVRALASQIEAAVYAVRTITLLGVGPDKKPLRFGAKGKLL
NVPGWRKLLQGDDAEEQKNETPSNPIPELEPGQILKVYSGEVLEKKTSPPKRFTDASLVG
EMKRRGIGRPSSYASIVKNIIDKGQVQMKGRSLIPGELGEATIALLEHNFSFLSLDFTRN
LEVALDRIANSEDTYMNVVQQFYQLLQSELQTLRAHPSAQGDPRASSTASAPTAPASDFL
CGKCGLPLVHRKKAGKGGFDFWGCSGYRTTGCKVGYPTRNGQPDFDNPRGL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgtcggcgtaggccaggatttcaaaccccactaccagatcctttcgggcaag
gaaaagaccgtcgcacggctgaaggagctgcggcagaaagccgtggaagtctacgtcgca
tccgacccggatcgggaaggcgaaagcatcggctggcacatcctccaggctgccgggatc
aagaactacaagcgcgttgccttcaaggaaatcaccaagtcgtgcatcagcgccgagctc
agctcaccacgccgtctggacctcccgaaggtcgcctcgcaggaatgccgtcgcgtcatc
gatcgcctggtggggtatctggtcacgccagagctgcggcgtgtgatgggtaggccaacc
accgccgggcgcgtgcagtccgtcgccgtgtacctggtggtcctgcgagagcgggagatt
cgcgccttcacagcaatcaagcatttcggggtggaactggccttcgtttcgcccagcgac
ggccgtacctggaaggcggagtgggatccagtgcccacgtttgccagcaaggagttcccg
tatgtccaggatcgtcaactcgcagaactggtgggggctatacgcaatgtgatcgtcgag
acctgcattgatggcgaagaaaccgatacgcctccggcgccgttcatctcctcttcgctc
cagatggccgccgggaatgcgctgaagtggtcacccgacaagacgatgaagatcgcccag
cggctgtatgaacaggggctcatcacctaccaccggacggacaaccccaatatttcgaag
gactccatgtcggatatccgtgctgtcgccaaggcattggggctgaagtgtgttgagcaa
cagcggatgttcaaggctgaccaggacgcccaagagggccaccccgccatcacccccacc
gattggacggccgctaccgctggtgaaactgctgatgagcaggccctgtaccagctcatt
cgagttcgtgcgcttgccagccagatcgaagctgccgtgtacgcagtgagaaccatcacc
ctcctgggcgtcggccccgacaagaagccgctgcgcttcggcgccaaagggaagctgttg
aacgtgcctggctggagaaaactgctgcaaggcgatgacgccgaggagcagaagaacgaa
acgccctcaaaccccatcccggagctggagccaggccagatcctcaaggtctacagcggc
gaggtcctggagaagaaaacctcccctcccaagcgcttcaccgatgccagcctggtgggc
gagatgaagcgccgcgggattggccggccatcctcctacgcctcgatcgtgaagaacatc
atcgacaagggccaggtgcagatgaagggccgaagcctgatccccggcgagctgggcgag
gccaccatcgcgctcctggagcacaacttcagcttcctcagcctcgactttacccgcaac
ctggaggtcgccctggaccggatcgctaacagcgaggacacctacatgaacgtggtccag
cagttctaccagctcctgcagtcggagctgcagacgctgcgcgcgcaccccagcgcacag
ggcgacccgcgagcaagctctaccgccagcgctcccacggcgccggccagtgacttcctc
tgcggcaagtgcggtctgcccctggtccaccgcaagaaagctggcaagggcggcttcgac
ttctggggctgcagcggctatcgcaccaccggctgcaaagtcggctatcccaccaggaac
ggccaacctgacttcgacaacccgcgcgggctatag
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