Pseudomonas aeruginosa SCV20265: SCV20265_4852
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Entry
SCV20265_4852 CDS
T02971
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCV20265_4852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paes03400
]
SCV20265_4852
Enzymes [BR:
paes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SCV20265_4852
DNA repair and recombination proteins [BR:
paes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCV20265_4852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
AAA_17
AAA_16
SLFN-g3_helicase
T2SSE
AAA_28
Mg_chelatase
TraI_hel_assoc_N
NTPase_1
PhoH
Motif
Other DBs
NCBI-ProteinID:
AHC78958
LinkDB
All DBs
Position
complement(5145619..5147784)
Genome browser
AA seq
721 aa
AA seq
DB search
MNPTLKQLAGEVRDGRDDQVAQPLAVRHDLLRQLDLWVARGWLRALDRAFVAFLVELQPQ
ADPRVLLAAALTSHQLGHGHVCLDLEATLGAPDAALSLPPEGDEGRDVLLPSQLLHGVRL
DAWREALAASPLVEVVDERPGDPEPSETATSPLVLCAQRLYLRRYWRHELEIALALRERL
GRQAPLAADLAPRLAALFAQAPTEDGQRVTDWQKLACALAARGYFSLITGGPGTGKTTTV
VRLLGLLQAPAVAAGQPLRIRLAAPTGKAAARLSESIGQQVRALPLAEDVLQAIPAEVTT
LHRLLGSRPDTRHFRHHRDNPLALDVLVVDEASMIDLEMMASLLDALPPQARLILLGDKD
QLASVEAGAVLGDLCRDAEEGWYSAETRAWLQRVSGETWQGLREGSAQAHPLAQQTVMLR
HSRRFGASSGIGRLARLVNRQQAGDARALLDSPPADLFDLRLRGERDAAFARLFVDGHPQ
APGTPYGYRHYLQRLAEGRPAAGLALEDGAWERWAQSVLTAFDAFRLLCALRRGPWGVEG
LNQRVAAELLRLGLIEADHGWYEGRPVLVTRNDYSLGLMNGDIGIALRLPERNDDGSLRF
ALRVAFPRNDGSGGVRFVLPSRLVEVDTVFAMTVHKSQGSEFAHTALVLPDALNPVLTKE
LVYTGITRARDWFSLVESLPGVFEEAVRRKVRRLSGLMLHLRPEREEQPPHAPGEQTELP
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaccctcaagcaactggccggcgaagtccgcgatggccgcgacgaccaggta
gcgcaaccgctggcggtacgccacgacctgctgcgccagctcgacctgtgggtggcgcgc
ggctggctacgggcgctggaccgggcgttcgtcgccttcctcgtcgagttgcagccgcag
gccgatccccgggtgctgctggcggcggcgctgaccagccaccaactgggccacgggcac
gtctgcctggacctggaggcgaccctcggcgcgcccgacgcggcactgtcgctgccgccg
gaaggcgacgaaggccgcgatgtgctgttgccgtcgcaactgctgcacggcgtgcgcctc
gacgcctggcgcgaggccctggcggcgtcaccgctggtggaggtggtcgacgagcgccca
ggcgatcccgagccgagcgagacggcgacctcgccgctggtgctttgcgcccagcgtctc
tacctgcgtcgttattggcggcacgagttggagatcgccctggccctgcgcgagcgcctg
ggtcggcaggcgcccctggccgcagacctggcgccgcgcctggccgcgctgttcgcgcag
gcgcctacggaagacggccagcgcgtcaccgactggcagaagctggcctgcgccctggcg
gcccgcggctatttcagcctgatcaccggcggtcccggtaccggcaagaccaccaccgtg
gtgcgcctgctcggtctgctccaggcaccggcggtagccgccggccagccgctgcgcatc
cgcctcgcggcgcccaccggcaaggccgcggcgcgtctctccgaatccatcggccagcag
gtccgggccctgccgctggcggaagacgtgttgcaggcgatccccgccgaggtcactacc
ctgcaccgtctgcttggcagccgtccggatacccggcacttccgccaccaccgggacaac
cctttggcgctggacgtgctggtggtggatgaggcctcgatgatcgacctggaaatgatg
gccagcctgctcgatgcgctaccgccgcaggcgcgcctgatcctgctcggcgacaaggac
cagttggcctcggtagaggccggcgcggtgctcggcgatctctgccgggatgccgaggag
ggctggtacagcgccgagacccgcgcctggttgcagcgggtcagcggcgaaacctggcag
ggcttgcgcgaaggttcggcgcaggcgcatccgctggcgcaacagaccgtcatgctgcgg
cattcccggcgcttcggcgcgagcagcgggatcgggcgcctggcgcggttggtcaaccgg
caacaggccggcgacgcgcgcgcgctgctggacagtccgcccgccgacctcttcgacctg
cgcctgcgcggggagcgcgatgcagccttcgcccggctgttcgtcgacggtcatccgcag
gcgccgggcacgccgtacggctaccggcactacctgcaacgcctggccgagggccgcccg
gccgccggactggcgctggaggatggcgcctgggagcgctgggcgcagtcggtactgacg
gctttcgacgccttccgcctgctctgcgcgctgcgccgcggcccatggggcgtggaagga
ctgaaccagcgggtagcggcagaactgctgcgccttggcctgatcgaggccgatcacggc
tggtacgaggggcggccggtactggtgacgcgcaacgactacagcctggggctgatgaac
ggcgatatcggcatcgccctgcgcctgcccgagcgcaacgacgacggcagcctgcgcttc
gcgctgcgcgtggccttcccgcgcaacgacggtagcggcggcgtgcgcttcgtcctgccg
agccgcctggtcgaggtggacaccgtgttcgccatgaccgtgcacaagtcgcagggttcg
gagttcgcccataccgcgctggtcctgccggacgcgctgaacccggtgctgaccaaggag
ctggtgtacaccggtatcacccgcgcccgcgactggttcagcctggtggaaagcctgccc
ggggtgttcgaggaagcagtgcggcgcaaggtgcgccggctcagcgggctgatgctgcat
ctgcggccggaaagggaagagcagccgccgcatgctccgggtgaacagaccgagctgccg
ttctga
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integrated database retrieval system
