Pseudomonas aeruginosa SCV20265: SCV20265_5029
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Entry
SCV20265_5029 CDS
T02971
Name
(GenBank) Type IV secretion system protein VirD4
Organism
paes
Pseudomonas aeruginosa SCV20265
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Paralog
GFIT
Motif
Pfam:
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
AHC79135
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Position
complement(5331481..5333514)
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AA seq
677 aa
AA seq
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MQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDFLGTPIYHPWRLFEW
WFFFDAYAPRVFDIGGAFAGGSGLVAVLVAIGMSIWRSRQSRLVTTYGSARWANAEDIRK
AGLTQPAGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVVHDIKG
ENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPASPFELTLHRMMTTPHLMNGN
GGSPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLISAE
HPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGR
LDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRIS
ETLGTATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSSVA
PIRAKKLRYYADANFKRRVLSPPALATASSPGRYADVPPARADDWSGLAIPPTPAAPATA
SADGLEHLGTADDGGPRRQPELTEAVAYDPEQAAPAADLGLLDDDDDLPLPLPRQLDTAM
QRTARLASLDPNDGIEL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggacgaacgtactgttcggtcagatcgccgtggtattcggcatcgtgatcgct
ggcgtctggagcgccacgcaatggacagccgccgctctgggctatcagctacgccttggc
tcgccctggtttgatttcctgggtacgccgatctaccacccgtggcggttgttcgagtgg
tggttcttcttcgacgcctacgcgccccgtgttttcgacatcggcggtgcgtttgccggc
ggcagcggccttgtcgctgtgctggtcgccatcggcatgtcgatctggcgctcgcgccaa
tcacgcctcgtcaccacctacggctcggcccgctgggccaacgcggaggacattcgcaag
gcgggcctcacgcagccggccggcgtgttcctcggccagcacgaccgccagtacctgcgc
cacgaaggcccggaacacgtcctgaccttcgcgccgacgcgcagcggcaagggtgtcggc
ctggtggtgccaacgctgctttcctggcccgcgtccgccgtcgtccatgacatcaagggc
gagaactggcagatcaccgccggctggcgctcgcgcttctcgcattgcctgctgttcaac
cccacggatgcgaagtcggcggcctacaacccgctgctggaggtgcggcgcggcgcgcat
gaggtgcgcgacgtgcagaacatcgcggacattctggtcgatcccgaaggcgcgctggag
aagcgcaaccattgggagaagacttcgcacgcgctgctggtgggcgccatcctgcatgtt
ctgtatgcgggcgaagacaagacgctgcgcggcgtcgccaacttcctctccgatccggcc
agtcccttcgagctgaccctgcaccggatgatgaccacgccccacctgatgaacgggaac
ggtggaagcccgcatccggtggtggcctctgcggcgcgcgaagtgctcaacaagagcgac
aacgagcgctcgggcgtgctgtccaccgccatgtcgttcctcggcctgtaccgagaccct
acggtggccgaagtcacgtcgcgctgcgactggcgcattgcagacctcatttccgccgag
cacccggtatcgctgtacctcgtagtgccgccttcggacatttcgcgcacgaagccgctg
atccgcttgatcctcaaccagatcgggcggcggctcaccgaatcactcgacggcagcgat
ggcatcgagcgccgccacaagctgctgctgatgctcgatgagtttccggcgctcgggcgc
ctggacttcttcgagacggccttggccttcatggcgggctacggcatccgcagcttcctc
atcgcgcagtcgctcaaccagatcgacaaggcgtatgggcagaaccattcgatcctcgac
aactgccatgtgcgcgtgacgttcgccaccaacgacgaacgcacggccaagcgcatttcc
gagacgctgggcaccgcgaccgagctgcgcgcgcagcgcaactacgcgggccatcgcctc
gcgccgtggctggggcacctcatggtgtcgcggcaggaaacggcccgcccgctgctcacg
ccgggcgaagtcatgcagctaccacccgacgaagccgtggtgatggtgtcgagcgtggcg
ccgatcagggccaagaagctgcgctactacgccgacgccaacttcaagcggcgcgttctg
tcgccgcctgcgctcgccacagcgtccagtccagggcgctatgccgatgttcctccggca
cgcgctgacgactggagtggcctggcgattccgccgacgcctgccgcaccggccacggca
tccgccgatggcctggagcacctgggaacggccgacgacggcggcccgcgccgccagccc
gagctaactgaggccgtcgcctacgaccccgagcaagccgcacccgcggccgacctcggg
ctgctcgatgacgacgacgacctgccgcttccccttcctcgccagctcgatacggccatg
cagcgcacggcccggctggcatccctcgaccccaacgatggaatcgaactatga
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