Pseudomonas aeruginosa SCV20265: SCV20265_5089
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Entry
SCV20265_5089 CDS
T02971
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes02020
Two-component system
paes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCV20265_5089
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCV20265_5089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paes03021
]
SCV20265_5089
Transcription machinery [BR:
paes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCV20265_5089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AHC79195
LinkDB
All DBs
Position
5392571..5394040
Genome browser
AA seq
489 aa
AA seq
DB search
MGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDNSDPLADGAEQ
AASAPQESPLQESATPSVESLDDDQWSERIPSELPVDTAWEDIYQTSASSLPSNDDDEWD
FTARTSSGESLHSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPEL
DVELDEVEVVLRRIQQLEPAGIGARNLRECLLLQLRQLPSTTPWLNEALRLVSDYLDLLG
GRDYSQLMRRMKLKEDELRQVIELIQCLHPRPGSQIESSEAEYIVPDVIVRKDNERWLVE
LNQEAMPRLRVNATYAGMVRRADSSADNTFMRNQLQEARWFIKSLQSRNETLMKVATQIV
EHQRGFLDYGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIFELKYFFSSHVS
TAEGGECSSTAIRAIIKKLVAAENAKKPLSDSKIAGLLEAQGIQVARRTVAKYRESLGIA
PSSERKRLV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggccagcagctgacgatgacgccgcagctgcaacaggccatacgcctcctccagcta
tccaccctggacctccagcaggaaatccaggaagcgctggaatccaatcccatgctcgaa
cgccaggaagacggcgacgatttcgacaacagcgaccctctcgccgatggcgccgaacag
gcggccagcgcgccccaggagagccctctccaggaaagcgccacccccagcgtcgaaagc
ctcgacgacgaccagtggagcgaacgcatacccagcgagttgccggtggataccgcctgg
gaagacatctaccagaccagcgccagcagcctgcccagcaacgacgatgacgaatgggac
ttcaccgcgcgcaccagcagcggcgagagcctgcacagccacctgctctggcaggtcaac
ctggcaccgatgtcggacaccgatcggatgatcgcggtgaccatcatcgatagcatcaac
aacgatggctacctcgaagagtccctcgaagaaatcctcgccgccatcgatccggaactg
gacgtcgagctcgacgaagtggaagtcgtgctgcgccgcatccagcaactggaacccgcc
ggcatcggcgcccgcaacctgcgcgagtgcctgctgctgcaactgcgccagttgccgtcc
accacgccctggctgaacgaagcgctgcgcctggtatccgactacctcgacctgctcggc
ggccgcgactacagccaattgatgcggcgcatgaagctcaaggaagacgaactgcgccag
gtcatcgagctgatccagtgcctgcatccccggcccggttcgcagatcgaatcgagcgaa
gccgaatacatcgtccccgacgtcatcgtgcgcaaggacaacgagcgctggctggtcgag
ctgaaccaggaggcgatgccacgcctgcgcgtcaacgccacctacgccggcatggtccgc
cgcgccgacagcagcgccgacaataccttcatgcgcaaccagttgcaggaagcccgctgg
ttcatcaagagcctgcagagccgcaacgaaacgctgatgaaggtcgccacccagatcgtc
gagcaccagcgcggtttcctcgactacggcgaagaagccatgaagccgctggtcctgcac
gacatcgccgaagcggtgggcatgcacgaatcgaccatttcgcgggtcaccacgcagaaa
tacatgcatacgccgcgcggcattttcgagctgaaatatttcttttcaagtcacgtcagt
accgccgaaggcggggaatgctcgtccaccgcgatccgcgcgatcatcaagaaactggtg
gccgcggaaaatgcgaaaaagccattgagcgacagcaagatcgctggtttactggaggca
cagggcattcaagtggctcgccgcaccgtcgccaaataccgcgaatccctgggcatagcc
ccttcgagcgagcgcaagcgactggtgtga
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integrated database retrieval system
