KEGG   Pasteurella aerogenes: NCTC13378_00396
Entry
NCTC13378_00396   CDS       T05989                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
paet  Pasteurella aerogenes
Brite
KEGG Orthology (KO) [BR:paet00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:paet02048]
    NCTC13378_00396 (hsdR)
Enzymes [BR:paet01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NCTC13378_00396 (hsdR)
Prokaryotic defense system [BR:paet02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NCTC13378_00396 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD
Other DBs
NCBI-ProteinID: VEG69624
LinkDB
Position
1:427553..430726
AA seq 1057 aa
MLINENTIEQACLRFLQELGWDYTHGSTINADGENPWRLRTDEVVFRSVLREAVERLNPQ
LPSATVDEVVALVCKTDITDLTGRNQQAYRYLREGVRVEYRENDEQKVEFARLIDFQQPS
LNRFDVVNQLTILGRKGNRRPDVICYINGLPVVVLELKNPLKENADLPQAFNQLQTYKQE
IGDLFVYNQALVISDGILAKVGSLTADLERFTPWRVVDEKNKQRISFEHELEGLVRGLLN
PASLLDYIQNFIVFEQTSSGRLVKKIAAYHQFYGVNEAVDCTLWAASEQGNGKIGVMWHT
QGSGKSLSMLFYAGKLLSQAELRNPTIVVVTDRNDLDGQLYATFSGGQALIRQQPVQADG
REALREELAKRETGGVIFTTIQKFGLQEGEQAHPVLNERHNIIVISDEAHRSQYGFSQSV
KLNDKNCTGTYRVGYAKHLRDALPNASFIGFTGTPISLEDKDTQAVFGKYVSIYDFDDAV
KDGATVPLSYEPRQIKIDASSDFENAVKEAQDLFVEDENSYRFRLRETLMGTDERLQRLA
EDFVQHFEQRSALVESKAMLVTMSRQICVKLYEKITALRPEWHSNDVNEGVIKIVMTGSA
DDSDEIQRHIYSAQDKKLLERRFKDPDDPLKIVIVRDMWLTGFDAPCCNTIYIDKPMRGH
NLMQAIARVNRVFRNKSRENGGLIVDYVGIVEELKEAKLEYSRANGKGEIIVDIAKVKAK
MLEYFDIIRVLFATPVKGESFKLNDVLQLEDETALFHQIMLGGNHIIGLDHQENKNQSDR
TSSENSRRKVFLNAVRSAKKGYCLCGTLPSVKTYEKELAFYDAVRAIIAKRSPGDKTNMA
DRQLKLVGLINRAVQADGAVNLLDMLHRDQPNISLLSEEFLDKVGKSKTKHLWLLAVERY
LRAEIQNKGGVNIAVQKDFEQRLAEAMRKYNNHTISILDVLDELIKMAKDFTERLQRGEK
LGLSPAEIAFYDALARNESAVRELGDEALKNLAKAITDKLRKSATIDWQYKEAVRAKMRN
LVRVTLRLFKYPPDKCDEAIQFVLEQAEVIADELTNG
NT seq 3174 nt   +upstreamnt  +downstreamnt
atgctcatcaacgaaaacaccattgaacaagcctgtttgcgatttttgcaggaattgggt
tgggattatacgcacggttcgaccatcaatgccgatggggaaaatccttggcggttgcgg
acggacgaggtggtgtttcgttcggtgttgcgtgaggcggtggagcggttaaatccgcag
ttgccgtctgccacggtggacgaagtggtggcgttggtgtgcaaaacggatattacggat
ttaacggggcgtaatcagcaagcctatcgctatttgcgtgagggcgttcgggtggagtat
cgggaaaatgatgagcaaaaggtggagtttgcccgtttgattgattttcaacagccaagc
ctgaaccgttttgatgtggtgaaccagctgacgattttggggcggaagggtaatcgccgt
cctgatgtgatttgttatatcaatggcttgcctgtggtggtgttggagctgaaaaatccc
ttgaaagagaatgcggatttgccacaggcgtttaatcagttgcagacgtataagcaggaa
atcggcgatctgtttgtgtataaccaagcccttgtgatcagcgatggtattttggcgaag
gtcggttcactcacggcagatttggagcggtttaccccttggcgtgtggtggacgagaag
aacaagcaacgtatttcctttgaacacgagttggaaggcttggtgcgtggtttgcttaat
ccagcgagtttgttggattatatccagaattttattgtgtttgagcaaacctcaagcggt
cgtttggtgaagaaaattgccgcttatcatcaattctacggtgtaaatgaagcggtggat
tgtacgctgtgggcggcgagcgagcagggcaatggcaaaatcggggtgatgtggcataca
caaggttcgggcaagtcgttgtcgatgttgttttatgcgggcaaattgttgtcgcaagcg
gagttacgcaacccgaccattgtggtcgttaccgaccgcaatgatttggacggtcagctt
tatgccaccttttcaggcggtcaggcgttaattcgtcagcaacctgtgcaagcagacggc
agagaggcgttgcgtgaagaacttgccaagcgtgaaacaggcggtgtgatttttaccact
attcagaaattcggtttgcaagagggcgagcaggctcaccctgtgttaaacgaacgacac
aatattattgtgatcagcgatgaggctcaccgttcgcaatatggttttagccaaagtgtg
aaactgaacgataaaaactgcacagggacatatcgtgtcggctatgcaaaacatttgcgt
gatgccttgccaaatgcctcttttattggctttactggcacgccgattagtcttgaagat
aaagatacccaagcggtatttggcaaatatgtgtcaatttatgactttgatgatgcagtg
aaagatggggcaacggtgccgttatcttatgaaccgcgtcaaattaagattgatgcgagt
agtgactttgaaaatgcagtgaaagaagcacaagatttatttgttgaagatgaaaattcc
taccgtttccgtttgcgtgagacgttgatgggaacagatgagcgtttgcaacgccttgct
gaagattttgtgcaacattttgagcaacgtagtgctttagtagaaagtaaggcaatgttg
gtgacgatgagtcgtcaaatttgtgtgaaattgtatgaaaaaatcaccgcacttcgtccc
gagtggcatagtaatgatgtgaatgaaggggtgattaaaattgtgatgacgggttcggca
gacgattctgatgaaattcaaaggcatatttattctgcgcaagataaaaagctgttggaa
cgccgttttaaagatcctgacgatccgctgaaaattgtgattgtgcgtgatatgtggcta
acaggttttgatgccccttgttgtaataccatttatatcgataaaccaatgcgtggacat
aatttaatgcaggcgattgcacgcgtaaaccgtgtgttccgcaataaaagccgtgaaaat
ggcggtttgattgtggattatgtaggtattgtggaagaactgaaagaagcgaaattggaa
tattcgcgtgcaaacggtaaaggcgaaattatcgtggatattgcgaaagtgaaagccaag
atgctggaatatttcgacattattcgtgtgctatttgcaacacctgtgaaaggtgaaagt
tttaaactgaatgatgtgttgcagttagaagatgaaacagcgttgttccatcaaattatg
ttgggtggcaaccatattattgggttagatcatcaagaaaataaaaaccaaagtgatcgc
acttcttcagaaaattctcgccgcaaagtctttttgaatgcggttcgtagtgcgaaaaag
gggtattgtttgtgtgggactttacctagtgtcaagacatatgagaaagagcttgccttt
tatgatgctgtgcgtgcgattattgcgaaacgttcgccaggcgataaaaccaatatggca
gatcgtcaattgaaattggtagggctaatcaatcgggctgtgcaggcagatggtgctgtg
aatttgttggatatgttacatcgcgaccaacctaatattagtttattatctgaagaattc
ttagacaaagtcgggaaaagtaagacaaaacatctgtggttgcttgcggtagagcggtat
cttcgtgctgaaattcagaataaaggtggtgtgaatattgcggtacaaaaggatttcgag
caacgtttagcggaagcgatgcgtaaatataataatcacaccattagcattttagatgtg
cttgatgaattgattaagatggcaaaagatttcacggagcgtttacaacgtggtgaaaaa
ttaggtttatcgccagcagaaattgccttttacgatgcccttgctcgcaatgaaagtgcg
gtacgagaattgggcgatgaagccttgaaaaacttagcaaaagcgattacggataaatta
cgcaaatccgccaccattgactggcaatacaaagaagcggtgcgtgcaaaaatgcgaaac
ttggtgcgtgttacgctgagattattcaaatatccaccggataaatgcgatgaggcaatc
caatttgtgttggaacaagcggaagtgattgcggatgaattgacgaatggataa

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