Pasteurella aerogenes: NCTC13378_00438
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Entry
NCTC13378_00438 CDS
T05989
Symbol
yhdI
Name
(GenBank) HTH-type transcriptional regulator YhdI
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
paet
Pasteurella aerogenes
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paet03000
]
NCTC13378_00438 (yhdI)
Transcription factors [BR:
paet03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC13378_00438 (yhdI)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
VEG69707
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Position
1:474491..475930
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AA seq
479 aa
AA seq
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MSNLIILMGSGVKILNYQLNKSHFKPLYLQLYEQIREAICQQQFRFGEKLPSKRELKDYL
QISQNTIESAYAQLVAEGYIEPKARQGYFVCFQAELEFTTQRKIKRTKEVVRPTKIHFDF
NPNRIDSKNFPLQIWRKCGRNCFSLQGENLLGLGDKQGDMALRREIADYLLASRGVHCEA
EQIVIGAGVEGCLQQFILLFNQLYPQKNFRYAMEKYGYDKVEKLFQLYDKAVIKLPINSE
TRGIDLQNLVQNDVNVAYLTPSHLYPFGQVLSISQRQQLLEWANGAEDRFIIEDDYDSEF
RYKGKPIPSLQGLDLQGKVIYLGSFSKLIMPGLRISFMVIPKSLLSAYHQYCDFFHSSVS
RFEQQRLTNFMQQGEFAKHIQRMRKIYRKKMELLCQLLANCKSKVRYYGEHSGFYLLIEI
LEQEKTQEKLTALALQQGIVVYPVDYEQRLLFSLGFGDLSENQLQQGVNLLLDIWQLKS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaatttgattattttaatggggtcaggtgtgaaaattctaaactatcaattaaat
aaatcgcactttaaaccgctgtatttgcagttgtacgaacaaattcgcgaggcaatttgt
cagcagcagtttcgctttggcgagaaattgccgtctaaacgcgaacttaaggattatttg
caaattagccaaaataccatcgaaagtgcatatgctcaattggttgccgaaggttatatt
gaacccaaagcgcgtcaggggtatttcgtttgttttcaggcggaattggaatttactaca
caacgcaaaataaaaagaacgaaagaggttgtgcgtcctactaaaatccattttgatttc
aatcctaatcgcatcgatagcaagaattttccgttacaaatttggcgaaagtgcggtcga
aattgctttagtttgcaaggtgaaaatttgttaggtttaggggataagcagggcgatatg
gcgctacgtcgtgaaattgccgattatttattagcctcacgtggcgtacattgtgaggcg
gaacaaattgtcattggtgctggcgttgagggatgtttacaacaatttatcttattattc
aatcaattatatccgcaaaaaaattttcgttatgcgatggaaaaatatggttatgacaaa
gtggaaaaattgtttcagttgtatgataaagcggtaattaaattgccgattaacagtgaa
acccgcgggattgatttgcaaaatttagtgcaaaatgatgtgaatgtggcgtatttaacg
ccgtcacacctttatccatttgggcaagtgttatccattagtcagcgtcaacagttattg
gaatgggcgaatggtgcagaagatcgttttatcattgaagatgattacgatagcgaattt
cgttacaaaggtaaacctattccatcgttacaagggcttgatttacaaggcaaagtgatt
tatctcggctctttttctaaattgattatgccgggattgcgcatcagttttatggtgata
cctaaatcgttgcttagcgcctatcatcaatattgtgatttttttcattcttccgtttcc
cgctttgagcagcaacgtttaaccaattttatgcaacaaggcgaatttgccaagcatatt
caacggatgcgcaaaatttatcgtaaaaagatggagttattgtgtcaattattggcaaat
tgcaaatctaaagtgcgttattatggggaacattctgggttttatttgctgattgaaatt
cttgagcaagaaaaaacgcaagaaaaattgaccgcacttgcattgcaacaggggattgtg
gtttacccggtggattatgagcaacgcctcttattttctttgggctttggcgatctgtca
gaaaaccaattgcaacaaggggtcaatttattattggatatttggcaacttaaatcataa
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