Pasteurella aerogenes: NCTC13378_00466
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Entry
NCTC13378_00466 CDS
T05989
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
paet
Pasteurella aerogenes
Pathway
paet03030
DNA replication
paet03430
Mismatch repair
paet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13378_00466 (dnaX)
03430 Mismatch repair
NCTC13378_00466 (dnaX)
03440 Homologous recombination
NCTC13378_00466 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paet03032
]
NCTC13378_00466 (dnaX)
03400 DNA repair and recombination proteins [BR:
paet03400
]
NCTC13378_00466 (dnaX)
Enzymes [BR:
paet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13378_00466 (dnaX)
DNA replication proteins [BR:
paet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13378_00466 (dnaX)
DNA repair and recombination proteins [BR:
paet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13378_00466 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_2
ResIII
Maf_flag10_N
AAA_16
AAA_30
TsaE
AAA_18
AAA_7
HIGH_NTase1_ass
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
VEG69758
LinkDB
All DBs
Position
1:504504..506588
Genome browser
AA seq
694 aa
AA seq
DB search
MSYQVLARKWRPKTFAEVVGQAPVLTALANSLRENRLHHAYLFSGTRGVGKTSIARLFAK
GLNCEQGVSAEPCGICEHCKAIEEGRFIDLIEIDSASRTKVEDTRELLDNVQYKPVQGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCMQFHLKALEQ
TQIAQHLAHILTQENIAFDTLAVEKLAKAAEGSLRDSLSLTDQAIAMGNGRVSKEIVNQM
LGLLDDNQPIEILYALQAGNGEALMKAVRQAGERGADWDGLLAAVAENLHHIAMLQLLPS
NIDEQQPLGFLAKHIAPQDLQFYYQIILNGRQELALAPNRQMGVEMVLLRALAFHPKLLA
ETAPVVTETSHEVLQSAVKNSQVFEMPVVSQTIKATYQPKLTPTNTPATKLSSQSHSSVA
LSATTLDVLDALNQLEKPVTSTSDELEKKNASGLNTLQNSQEKTAENLTALSVVDMPPAK
AEKNLSKSSSAANTNILSDEAENEEPVDNADNSDAEEILSAETYRWEWINPEMAEEEQAI
RPSEIKQAILQNMTEALQQRIIDTACQLDEWTNLIEKIGISGLLKEMALHSFILQQTEDT
LVLGLAEKKSHLFKEKNTQQLQQIISEFYQKPLRLDIQLVSDAQEEKMTPAAYRHKVYQQ
FYEQAKQELQIEPQILLLQREFDGALDLDSIRPV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtattagcaagaaaatggcgaccaaaaacctttgcggaagttgtcggg
caagccccggtgctgaccgcgcttgctaatagcttgcgtgaaaatcgcttgcaccatgct
tacttgttttccggtacccgcggtgtaggcaagacgtctattgcgcgcctttttgctaaa
ggattgaattgtgagcaaggcgtcagtgctgaaccttgtggcatttgtgaacattgtaaa
gctattgaagaagggcgatttattgatctgatcgagattgactcggcatctcgtaccaaa
gtggaagatacgcgggaattgctggataatgtgcaatataaaccggtgcaggggcgctat
aaagtctatttaatcgacgaagtgcatatgctatcgcggcattctttcaatgcgttgttg
aaaaccttggaggaaccgccggaatatgtcaaatttttgctggcgaccactgatccgcaa
aaattgccggtaaccattttatcccgctgtatgcaatttcatctaaaagcgctggagcag
acgcaaattgctcaacatttagcacatattttaacgcaagaaaatattgcttttgacacg
ttggcggtggagaaattagccaaagcggcagagggaagtttgcgcgatagcctcagttta
actgatcaagccattgccatgggaaatggtcgggtgagcaaagagattgtcaatcagatg
ttgggattattggatgataatcaaccgattgagattttatatgcgttgcaagctggcaat
ggcgaagccttgatgaaagcggtgcgacaggcaggtgagcgtggcgcagactgggatgga
ttattggcggcggttgctgaaaatttacatcatattgccatgctgcaattgttgccgagt
aatattgatgagcagcagcctttaggttttcttgccaaacatattgcgccgcaagatttg
caattttattatcaaattatcctcaacggacgccaagaattagctttggcaccgaatcgt
caaatgggcgtcgaaatggtgttattgcgggcgttggcgtttcatcccaaattgcttgct
gaaactgcaccagttgtaacggaaacaagccatgaggtgctgcaaagtgcggtcaaaaat
tcgcaagtttttgaaatgccagttgtttctcaaaccattaaagccacatatcaaccgaaa
ttgacgccgactaatactccagcgacaaaactgtcgtcacagtcccattcaagtgtggca
ttatccgctaccacccttgatgtattagatgcgttaaatcagttggaaaaaccggtgaca
tcgacctcggatgagctagaaaaaaaaaacgctagcgggttaaatacgcttcaaaatagc
caagaaaaaacagctgaaaatttgaccgcactttctgtggtggatatgccgccggcgaaa
gcggaaaaaaacttatctaaatcatcttctgctgccaatactaacatattgtctgatgag
gcggaaaatgaagagcctgttgataacgcagataattcggatgctgaagaaatactatcg
gcggaaacttaccgctgggaatggattaatccggaaatggcggaggaagaacaagctatt
cgcccatcagaaattaagcaagcgattttgcaaaatatgacggaagcgttgcagcaacgc
attattgataccgcttgccagttagatgaatggacgaatttgattgaaaaaattgggatt
tcgggcttgttgaaagaaatggcgttgcacagttttattttgcaacaaacagaagatacg
ctggttcttgggttggctgaaaaaaaatcccatttattcaaagaaaaaaatacgcagcaa
ttacaacaaattatcagtgaattttatcaaaaaccgctccggctagatattcagttggtc
agcgatgcgcaagaagaaaaaatgacaccggcagcttatcggcataaagtgtatcaacaa
ttttatgaacaagcgaagcaagagctgcaaattgaaccgcaaattttgctattacaacgt
gagtttgatggggcgctggatttagatagtattcgtccggtttag
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