Pasteurella aerogenes: NCTC13378_00558
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Entry
NCTC13378_00558 CDS
T05989
Symbol
msbA_1
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
paet
Pasteurella aerogenes
Pathway
paet02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC13378_00558 (msbA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paet02000
]
NCTC13378_00558 (msbA_1)
Enzymes [BR:
paet01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NCTC13378_00558 (msbA_1)
Transporters [BR:
paet02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCTC13378_00558 (msbA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
DEAD
ABC_ATPase
AAA_29
AAA_30
MMR_HSR1
nSTAND3
DUF5906
Zeta_toxin
AAA_25
APS_kinase
AAA_18
VCPO_N
NB-ARC
AAA_24
Motif
Other DBs
NCBI-ProteinID:
VEG69941
LinkDB
All DBs
Position
1:595695..597443
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AA seq
582 aa
AA seq
DB search
MQDKDLSTLQTFKRLWPMISPFKIGLIVAGITLVFNALTDAALIQMLKPLLDDGFGKADV
SFLRMMAIVVVLLIIVRGATSFVSSYCLAWVSGKVVMTMRRRLFKHLMYMPVSFFDQNSA
GKLLSRITYDSEQVANSSSNSLTTIVREGAYILSLLGVMIYTSWQLSVVLFIIGPIIAVL
IRVVSKTFRRLSKNMQNSMGELTSTAEQMLRGHKVVLSFGGQIIEEKRFNAVSNDMRRKG
MKMTVADAISDPIVQIIASFALSAVLYLATLPEIMTQNLTAGSFTVVFSSMLAMMRPLKS
LTNVNANFQRGMAACQTLFAILDMETEKDKGTYHVEKAKGNLRFNNVSFAYEGKDERALN
HISFSVPAGKTVALVGRSGSGKSTIANLVTRFYDIQEGEITLDDINIQDYRLTNLRENCA
VVSQQVHLFNDTVANNIAYAAQDKYSREDIIKAATAAHAMEFIEKLPQGLDTLIGENGAS
LSGGQRQRLAIARALLRDSPVLILDEATSALDTESERAIQSALEELQRDRTVLVIAHRLS
TIENADEILVIEHGEIKERGNHQQLLALDGAYKQLHTMQFSQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaagatctttctacgctccaaacatttaaacgcttatggccgatgatttcg
ccttttaaaatcgggctgattgtggctgggattactttagtattcaatgccttgaccgat
gcggcgttaattcaaatgttaaaacccttgttggacgacggttttggtaaggccgatgtt
tcttttttacgtatgatggcgattgtggttgtgttgctgattattgtgcgcggcgcgacc
agttttgtgtcttcttattgtttggcgtgggtgtctggcaaagtggtgatgaccatgcgt
cgtcgtttgtttaaacatttgatgtatatgccagtgagtttttttgaccaaaattccgct
ggtaaattgctttctcggattacttatgatagtgaacaagtggcgaattcttcttcaaat
tcgttaaccactattgtgcgcgagggggcgtatattctttctttgcttggtgtgatgatt
tataccagttggcaactttctgtggtgttatttattatcgggccgattattgcggtgtta
attcgcgtggtttccaagacttttcgtcgtttaagtaaaaatatgcaaaattccatggga
gaattaacttcaaccgccgagcaaatgttgcgtgggcataaagtggtattgtcttttggt
gggcaaattattgaagaaaaacgctttaatgcggttagtaatgatatgcgacgtaagggc
atgaaaatgacagttgctgatgcgatttccgatcctatcgtacaaattatcgcctctttt
gccttatctgcggtgttgtatttggcaaccttgcctgaaattatgacccaaaatttaact
gccggttcttttactgtggtcttttcttccatgttagccatgatgcgcccgttaaaatct
ttgactaatgtgaatgcgaatttccaacgtggtatggcggcgtgccaaaccttatttgcg
attttggatatggaaacggaaaaagataaagggacgtatcatgtggaaaaagccaaaggc
aatttgcgttttaataacgtaagttttgcttatgagggtaaggatgaacgtgcgttaaat
catatttcattttcagtccctgcagggaaaactgtggcgttggtggggcgttccggatcc
ggaaaatctacgattgccaatttggtgactcgcttttatgacattcaagaaggcgaaatt
actttggacgatattaatatccaagattatcgcttgaccaatttgcgtgaaaattgcgcg
gttgtatcgcaacaagtgcatttatttaatgatacagtggcgaataatattgcctatgcg
gcgcaagacaaatacagtcgtgaagatattattaaagcggcaactgcagcgcacgcgatg
gaatttattgaaaaattgccgcaaggtttggatacgttgattggcgaaaatggcgccagt
ttatccggcgggcagcgccaacgtttggcaattgcgcgtgctttattgcgcgattcgccg
gtgctgattttggatgaagccacttcggcattggatacggaatcggaacgcgctattcaa
tctgccttggaagaattgcaacgtgatcgtacggtgttggtgattgcgcaccgtttatcg
accattgaaaatgctgatgaaattttggtgattgagcatggtgaaattaaagagcgtggt
aatcatcagcaattattagcgttagatggtgcctataaacaattgcatactatgcaattt
agtcaataa
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