Pasteurella aerogenes: NCTC13378_00601
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Entry
NCTC13378_00601 CDS
T05989
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
paet
Pasteurella aerogenes
Pathway
paet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC13378_00601 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paet03400
]
NCTC13378_00601 (xseA)
Enzymes [BR:
paet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC13378_00601 (xseA)
DNA repair and recombination proteins [BR:
paet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC13378_00601 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
RecJ_OB
RsmF_methylt_CI
DUF7605
Motif
Other DBs
NCBI-ProteinID:
VEG70023
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All DBs
Position
1:638844..640178
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AA seq
444 aa
AA seq
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MNDKIYSVSQLNASVRQLLEGQLGVVWLTGEISNLTQPVSGHWYLTLKDENAQVRCAMFR
MKNMRVGFKPQNGIQILVRASVSLYEPRGDYQLIIETMHPAGEGLLQQQFEQLKMKLAAE
GLFAQNLKKNLPHFCKAVGIITSKTGAALQDILRILQRRDPSLKIVIYPTAVQGNEAAVE
IAQMIAIANARKEVDVLIVGRGGGSLEDLWCFNEEVVARAIFASHLPIISAVGHETDVTI
ADFVADLRASTPSAAAELVSRNQQELIQQLQHRQQLLEMAMDRLFNQKMQQLQRLRLRLQ
QQHPQARLRAQCHLLAQLQQRLHWSIVRYSEKNQQKLTALSQRLMRNPLPYRLHQQRQYV
QQLCAKLNFCLNQHLQMRQHHLAHLCGKLDSLSPLKVLSRGYSIAENPQGEAVRQLAQVN
IGELLTTRVEDGCIISRIEKKEKK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataagatttattccgtttcccagctaaacgcttccgtacgtcaattattggaa
gggcagttgggcgtagtgtggttaaccggtgaaatttccaatttaacccaaccggtgtcc
gggcattggtatttgaccttaaaagacgaaaatgcacaggtgcgttgcgccatgtttcgc
atgaaaaatatgcgagttgggtttaagccgcaaaatggcatacaaattttggtgcgagcg
tcggtgagtctgtatgaaccgcgcggcgattatcaattaattattgaaaccatgcatcct
gccggcgaaggtttgttgcaacaacaatttgagcagctcaaaatgaaactggcggcggag
gggttatttgcgcaaaatctgaaaaaaaatctaccgcacttttgtaaagcagtgggaatt
attacatccaaaaccggtgcggcgttgcaagatattttgcgcattttacaacgccgcgat
ccgagtttaaagatagtgatctatccaactgcggtgcaaggtaatgaagccgcggtggag
attgcacagatgattgccattgctaatgcgcgcaaggaagtggatgtcttaattgtcggg
cgcggcggcggttcgttggaggatttgtggtgttttaacgaggaagtggtggcgcgtgct
atttttgcttcccatttgccgattatcagtgcggtagggcatgaaaccgatgtgactatt
gctgattttgttgctgatttgcgcgcatcgaccccatctgccgcggcggaattggttagc
cgtaatcaacaagaattgatacaacaattgcagcaccgtcaacaactccttgaaatggcg
atggatcggttgtttaaccaaaaaatgcaacagttgcagcgtttgcgtttacgcttacag
caacaacatccgcaagcccgtttgcgcgcgcaatgtcatttattagcgcaattgcagcaa
cgtttgcattggtcgattgtgcgttacagcgaaaaaaatcagcaaaaattgaccgcactt
tcgcagcgtttgatgcgtaatccgctgccttatcggttgcatcaacagcgacaatatgta
cagcaattgtgtgctaaattgaatttttgcctcaatcaacatttacaaatgcgacaacat
cacttagcgcatttgtgtggtaaattagatagtttaagcccgctcaaagtcttgtcgcgg
ggatattcgattgcagaaaatccgcaaggcgaagcggtgcgccaattggcgcaagtgaac
attggtgaattgctgaccacgcgggtggaagacggttgtattattagccgaattgagaaa
aaagaaaaaaagtaa
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