Pasteurella aerogenes: NCTC13378_00965
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Entry
NCTC13378_00965 CDS
T05989
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
paet
Pasteurella aerogenes
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paet03016
]
NCTC13378_00965 (rnd)
Enzymes [BR:
paet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NCTC13378_00965 (rnd)
Transfer RNA biogenesis [BR:
paet03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC13378_00965 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
VEG70747
LinkDB
All DBs
Position
1:complement(1029099..1030250)
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AA seq
383 aa
AA seq
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MTNKKELENPPHFVVISSNQDLYEVCLQAERKSAVALDTEFVRTRTYYAQLGLIQLYDGE
QVSLIDPNHIDDFSPFIRLLANPKVVKVLHASSEDLEVFQHYFQQLPTPMLDTQIIAAFL
GLGNSVGLASLLKHYFGLEMDKGASRTDWLARPLSDTQLYYAAADVWYLLPLYVRMQQAL
SQTAWQSAVEYDCENLLHKREQGKDSEMAYLNIPNAWKLNSEELMRLKLLAKWRQEEAIK
RNLALNFVVKGENLWQVAKYNPKHTSALLEIGLSTQEVRIHGKKMLQVLEQMKRIDMADY
PPVINRIADDPRYKRAIKLLQQHVKDVVPPTLAPEVLAGKKSLESLLRWIWLKQQDPNQL
PELLCGWRREYGLKLLKSLQSFA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataaaaaagaactcgaaaatccaccgcactttgtcgtcatttcctctaatcaa
gatttatatgaggtgtgtttacaagcggaacgtaaaagtgctgttgctttagacaccgaa
tttgtgcgcacccgtacatattatgctcaattaggcttgatccaattatatgatggtgag
caagtcagtttgattgatcctaatcatattgatgatttttcgccttttatccgtttgttg
gcaaatcccaaagttgtcaaggtattacacgccagcagtgaagatttggaggtgtttcag
cattatttccaacagcttcctacgccgatgcttgatacgcaaattattgccgctttttta
gggctgggcaattctgttggattggcgagtttgctgaaacattattttggtctggaaatg
gacaaaggcgcctcaagaaccgattggctcgcccgccctttatcggacacgcaactttat
tatgccgctgctgatgtttggtatttattgccgctttatgtgcgtatgcaacaagcgtta
agccaaacagcatggcaaagtgcagtggaatatgattgtgaaaatttattgcataaacgt
gaacaaggcaaagacagtgaaatggcgtatttgaatattcctaatgcttggaaattgaat
tcggaagaattaatgcgcttaaaattgttagcaaaatggcgtcaagaagaagcaattaaa
cgtaatcttgcactcaattttgtggtaaaaggcgagaatttgtggcaagttgctaaatat
aatccgaaacatacttcggcattattagagattggattaagtacgcaagaagtacgtatt
catggtaaaaaaatgttacaagttttggagcaaatgaaacgaattgatatggcagattat
ccaccggtcattaatcgaatcgctgacgatcctcgttataaacgtgcgatcaagttgtta
cagcagcatgtcaaggatgtggtgccaccaactctcgcgcctgaagtacttgctggtaag
aaaagtttagaaagtttgttgcgttggatttggttaaaacaacaagatcctaatcaattg
ccagaattgctttgtggttggcgcagagagtacgggttaaagctgctgaaatctttacaa
agctttgcataa
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