Pasteurella aerogenes: NCTC13378_00996
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Entry
NCTC13378_00996 CDS
T05989
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
paet
Pasteurella aerogenes
Pathway
paet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13378_00996 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paet03400
]
NCTC13378_00996 (xthA)
Enzymes [BR:
paet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC13378_00996 (xthA)
DNA repair and recombination proteins [BR:
paet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC13378_00996 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
VEG70797
LinkDB
All DBs
Position
1:1062883..1063686
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AA seq
267 aa
AA seq
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MKIMSFNINGLRARPHQLEAVIEKYQPDVLGLQEIKVADEDFPHNLVEHLGYHVFHHGQK
GHYGVALLLKQAPTQIRKGFPTDDQAAQKRIIMADLATSFGTLTVINGYFPQGESRNHET
KFPAKAKFYADLQRYLEQDHPAQQPIVIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL
PEEREWYQRLYQFGLVDTFRQLNPTVNDHFSWFDYRSKGFDDNRGLRIDHILANQDLAQH
CVDAGIALDIRAMEKPSDHAPIWAEFK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgtcttttaatatcaatggattacgtgcaagaccacatcaattagaagcg
gtcattgaaaaatatcaaccggatgtactgggattacaggaaattaaagttgcggatgaa
gactttccacataatttagttgaacatttgggctatcacgtttttcatcacggtcagaaa
ggacattatggcgtcgccttattgttaaaacaggcaccaacacaaattcgcaaagggttt
ccgaccgatgatcaagcggcacaaaaacgcattattatggcagatttagccacctctttt
ggcacattaaccgtaattaatggctatttcccgcaaggtgaaagccgcaatcatgaaaca
aaatttccagctaaagccaagttttatgcggacttacagcgctatttagaacaagatcat
ccagcccaacaaccaatcgtgattatgggcgacatgaatatcagcccgagcgatttggat
attggtatcggcgaagaaaatcgcaaacgttggttgcgtaccggcaaatgttcgttttta
ccagaagaacgcgaatggtaccaacgtttgtatcaatttggtttagtcgatacttttaga
caattaaacccaacggttaacgatcacttttcgtggtttgactatcgttctaaagggttt
gacgataaccgtgggttacgcattgatcatattttggcaaatcaagatctggcacaacat
tgcgtggatgcaggcattgcattagatattcgcgcgatggaaaaaccctcagatcatgcg
ccaatctgggcagagtttaaatag
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