Pasteurella aerogenes: NCTC13378_01264
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Entry
NCTC13378_01264 CDS
T05989
Symbol
ruvB
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
paet
Pasteurella aerogenes
Pathway
paet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC13378_01264 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paet03400
]
NCTC13378_01264 (ruvB)
Enzymes [BR:
paet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13378_01264 (ruvB)
DNA repair and recombination proteins [BR:
paet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13378_01264 (ruvB)
RecFOR pathway proteins
NCTC13378_01264 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
Rad17
AAA_16
AAA_14
nSTAND3
TIP49
AAA_2
AAA_18
RNA_helicase
bpMoxR
NB-ARC
AAA_17
NTPase_1
Sigma54_activ_2
AAA_28
AAA_24
ABC_tran
Bac_DnaA
TsaE
NPHP3_N
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
VEG71297
LinkDB
All DBs
Position
1:complement(1358938..1359945)
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AA seq
335 aa
AA seq
DB search
MIEADRIISATEKLDDEYLDRAIRPKLLADYVGQPQVCEQMEIFIQAAKLRQDALDHLLI
FGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
AIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYSVEDLTAIVTRSAGCLNLEIEPDAAQEIACRSRGTPRIANRLLRRVRDYADVKNQG
VISVKIAQAALSMLDVDHAGFDFMDRKLLQAIIERFDGGPVGLDNLAAAIGEERDTIEDV
LEPFLIQQGFLQRTPRGRIATSRTYRHFGLQKLAE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcggatcgtattattagcgcaacagaaaaattggatgatgaatatttagat
cgtgctattcgtccaaaattattagcggattatgtgggacaaccgcaggtttgtgaacaa
atggagatctttatccaagcagcgaaattgcgtcaagatgccctcgatcacttgctcatt
ttcggtcctccgggattgggaaaaactacacttgcgaatattgttgcgaatgaaatgggg
gtgaatattcggacgacatccggtccagtattggaaaaagccggtgatttggcggcaatg
ttgactaatttggaaccgcatgatgttttgtttattgatgaaattcatcgtttatctccg
gcaatcgaggaggtgttatatccggcaatggaagattatcaactggatattatgatcggc
gaaggaccggctgcgcgttcaattaaattagatttaccaccttttaccttagtcggcgcg
acgactcgagccggctcgctgacatctccgttacgtgatcgttttggtattgtgcaacga
cttgagttttattcggtagaagatttaaccgctattgtgacgagaagtgcgggttgttta
aacttagaaattgaacctgatgcggcacaagaaattgcctgtcgttcacgtggtacgcca
cgcattgccaatcggttgttgcgtcgagtacgcgattatgcggatgtcaaaaatcaaggg
gttatttcggtaaaaatcgctcaagctgcattgtctatgctagatgtagatcatgcaggc
tttgattttatggatcgtaaattgctgcaagcaattatcgagcgttttgacggtggcccg
gtgggattggataacctcgctgccgctatcggcgaagaacgagataccattgaagatgtg
ttggaaccttttttaattcagcaaggttttttgcaacgcaccccgcgcggacgaatcgcc
acctcgcgtacttatcgacattttggcttgcagaaactggcggagtag
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