Pasteurella aerogenes: NCTC13378_01532
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Entry
NCTC13378_01532 CDS
T05989
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paet
Pasteurella aerogenes
Pathway
paet03030
DNA replication
paet03410
Base excision repair
paet03420
Nucleotide excision repair
paet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13378_01532 (polA)
03410 Base excision repair
NCTC13378_01532 (polA)
03420 Nucleotide excision repair
NCTC13378_01532 (polA)
03440 Homologous recombination
NCTC13378_01532 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paet03032
]
NCTC13378_01532 (polA)
03400 DNA repair and recombination proteins [BR:
paet03400
]
NCTC13378_01532 (polA)
Enzymes [BR:
paet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13378_01532 (polA)
DNA replication proteins [BR:
paet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC13378_01532 (polA)
DNA repair and recombination proteins [BR:
paet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC13378_01532 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13378_01532 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VEG71847
LinkDB
All DBs
Position
1:complement(1628004..1630880)
Genome browser
AA seq
958 aa
AA seq
DB search
MAQIAENPLVLVDGSSYLYRAFHAFPPLTNSLGEPTGAMYGVLNMLKSLIAQVQPTHIAV
VFDAKGKTFRDEMFEQYKSHRPPMPDELRSQILPLHNIIKALGIPLLVVEGVEADDVIGT
LALQASKNGQKVLISTGDKDMAQLVDDNIMLINTMNNTLLDRAGVIEKYGIPPELIIDYL
ALMGDSSDNIPGVAGVGEKTALGLLQGIGSMAEIYANLDKVADLPIRGAKKLGEKLQAAK
ADADLSYLLATIKTDVELALTPDQLILGQNDNDQLIEYFARYEFKRWLNEVMSGESSLTN
GAEQRVKPTAYQATATLSQAEKVGKSAVKNVIKIDRSLYQQIDTQEKLVAWMNKINATKF
IAIDTETDSLDPMVANLVGISLALENGEAGYIPLAHVREVSIEQSQGDLFAENKAVETSF
ERVLPQLMLADCVAQLKPLLEDPQIKKVGQNLKYDLTVLANHDVQLAGIAFDTMLESYVL
NSTGRHNMDDLSERYLGHQTIAFETLAGKGKNQLTFDKIDLAQATEYAAEDADVTMKLHQ
TLWQELLQTPELVKLFNEIELPLVEVLSRIERNGVLIDSQTLLTQSEEIAQRLTALEQAV
HQEAGEAFNLASTKQLQEILFEKLGLPVIAKTPKGAPSTNEEVLEELAQQGHLVPKLLME
HRGLAKLKSTYTDKLPQMINPHTGRVHTSYHQAVTITGRLSSSDPNLQNIPIRNEEGRRI
RQAFVAPKDFLIVAADYSQIELRIMAHLSQDPNLIKAFAEGKDIHRSTAAEIFGLPLEEV
SAEQRRGAKAINFGLIYGMSAFGLARQLGIGRNEAQQYMDLYFQRYPGVQRFMADIREKA
KAQGYVETLFGRRLYLPEIHSSNAMRRKGAERVAINAPMQGTAADIIKRAMIALDSEIAP
DPDIRMIMQVHDELVFEVRSKNVEKYRQLIKNIMENAAKLAVPLIVDVGVGDNWDEAH
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaatcgctgaaaatccgctcgtcctggtggacggttcttcctatttatatcgc
gcgtttcatgcatttcctccgctgaccaattcccttggggagccaacgggcgcgatgtat
ggcgtattaaatatgctgaaaagtttaattgcgcaagttcagccgacgcatattgcagtc
gtgtttgatgcgaaaggcaaaacctttcgtgatgaaatgtttgaacaatataaatctcat
cgtccaccaatgccggatgaattgcggtcgcaaattttaccattacacaatattatcaaa
gccttaggtattcctttattggtggtggaaggtgtggaggcggatgatgttatcggcact
ttggcgctacaggcatctaagaatgggcaaaaagtactcataagtaccggcgataaagat
atggcgcaattggtggatgacaatattatgttgatcaacaccatgaataatacgctgctg
gatcgtgccggagtgattgaaaaatatggaattccaccagaattaattattgattattta
gccttgatgggcgatagctcggataatattccgggggttgctggcgtgggtgagaaaact
gctttaggtttattacaagggatcggcagcatggcggaaatttatgctaatttggataaa
gttgccgatttgcctattcgtggtgcgaaaaaattaggcgaaaaattgcaagctgctaaa
gcagatgcggatttatcttatttgctggcgacaattaaaactgatgtagaattagcctta
acaccagatcaattgatcttagggcaaaatgataatgatcaattgattgaatattttgcg
cgttacgaattcaaacgttggttaaatgaagtgatgagtggggaaagttcgttgactaat
ggtgctgaacaacgggtgaaacctaccgcttatcaggcaactgcgaccttgtcgcaagcg
gaaaaggtgggcaaaagtgcggtcaaaaatgtgataaaaattgaccgctctttataccaa
caaattgatactcaagaaaaacttgtcgcgtggatgaataaaattaacgcaacgaaattt
attgcgattgatacggaaaccgattctttggatccgatggtggcgaatttggttggcatt
tcgctggccttagaaaatggcgaagccggttatattcctttggcgcacgtgcgtgaagtg
agtatcgagcagtcacaaggcgatttatttgccgagaacaaggcggtagaaacatctttt
gagcgtgttttgccgcaacttatgctggcagattgtgtcgcgcaattaaaaccactattg
gaagatccgcagattaaaaaagtggggcaaaatttaaaatatgatttgaccgtattagca
aatcatgacgtgcaacttgccggcatagcatttgatactatgttggaatcttacgtatta
aacagcacggggcggcataatatggacgatttatccgaacgctatttagggcatcaaacc
attgcctttgaaacccttgccggcaaagggaaaaatcagcttacctttgataaaatcgat
cttgctcaagcgacggaatatgcggcagaagatgcggatgtgactatgaaattacatcaa
actttgtggcaagagttgttgcaaacaccggaattagtaaaattattcaatgagatagaa
ttgcctttagtggaggtgttatctcgaattgagcgtaatggcgtactaattgacagtcaa
actttattgacacaatcggaagaaattgcgcaaagattgaccgcacttgagcaggcggtg
catcaagaagcgggtgaagcctttaatttggcgtccacgaaacaattacaggaaatttta
tttgaaaaattaggcttacctgtaattgctaaaacgccgaaaggcgcaccttctacgaat
gaagaggtgctagaagaattggcgcagcaagggcatttggtacctaaattgttaatggaa
caccgcgggcttgccaagttaaaatccacttacacggataaattgccacaaatgatcaat
ccgcacaccggacgggtacatacctcttatcatcaagcggtgactattactgggcggtta
tcttccagcgatccgaatttgcaaaatatccctattcgtaacgaagaagggcggcgtatt
cgccaagcctttgttgcacctaaagattttttgattgttgccgctgactattcgcaaatt
gagttgcgtatcatggcgcatttatcacaagatccaaatttgatcaaagcctttgcggaa
ggtaaagatattcaccgttccaccgcagcggaaatttttggtttgccgctggaggaagtc
agtgcggagcaacgtcgcggcgctaaagcgattaattttggtttgatttatggcatgagt
gcctttggtttggcgcgtcaattgggcattgggcgaaatgaagcgcagcaatatatggat
ttgtattttcagcgctatccgggagtgcaacgctttatggcagatattcgcgaaaaagcc
aaagcgcagggctatgtggaaactttgtttgggcgtcgtttatatttgccagaaattcat
tcttcaaacgctatgcggcgcaaaggtgcggagcgagtggcgattaatgcgccgatgcaa
ggcactgcagccgatattattaaacgtgcgatgattgcgttggatagtgaaattgcgcca
gatcccgatattcgcatgattatgcaagtacatgatgaattggtgtttgaagtgcggtca
aaaaatgtcgagaaatatcgtcaattgatcaagaacatcatggaaaatgcggcgaagctg
gctgttccgttaattgtggatgttggtgttggtgataattgggatgaagcgcactag
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