Pasteurella aerogenes: NCTC13378_02063
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Entry
NCTC13378_02063 CDS
T05989
Symbol
yjgR
Name
(GenBank) protein YjgR
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
paet
Pasteurella aerogenes
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paet03400
]
NCTC13378_02063 (yjgR)
DNA repair and recombination proteins [BR:
paet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NCTC13378_02063 (yjgR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_16
ResIII
AAA_22
FtsK_SpoIIIE
TrwB_AAD_bind
CbiA
AAA
AAA_30
T2SSE
P-loop_TraG
AAA_25
SRP54
AAA_7
AAA_19
AAA_6
nSTAND3
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
VEG72823
LinkDB
All DBs
Position
1:2147292..2148791
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AA seq
499 aa
AA seq
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MQYVLAQTEQGQTLGITAKMANRHGLIAGATGTGKTVTLRKMAEAFSDDGVPVFLVDVKG
DLSGLVQAGEMQGKIAERITQFNLGDEQYLSGYPVSFWDAFGETGIPLRTTITEMGPLLL
SRLLNLNATQEGLLNLVFRVADDRGLLLIDLKDLRAMLKFVAENAKSFQLEYGNVSAASV
GAIQRALLALENEGAASLFGEPALNLEDWLQTRDGRGVINVLNAEKLINSPKMYSAFLLW
LMAELFENLPEVGDPDKPKFVMFFDEAHLLFDDAPQALIERVEKVVRLIRSKGVGVYFVT
QNPLDLPDTVLGQLGNRVQHALRAFTPRDQKAVKSAAETFRANPNVNVVETISTLGVGQA
LVSFLDEKGMPTPVEVAYIYPPRSQLKPLTTLERQDWVKADDLYAYYSAYMDNESAFEVL
NQQADLAAVAQKQAEQAQAEEENGLMSSLGRMLFGQKKRGEQLTVTEQVVSSVAKSVGRN
LRNQITKQIMRGILGALKK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgtattagcacaaaccgaacaggggcaaaccttggggattaccgccaaaatg
gcgaatcgacacggtttgattgccggcgcaaccggaacagggaaaacggtgaccttacgc
aaaatggcggaagcttttagtgatgatggtgtaccggtttttttagtggatgttaagggc
gatttatccggtttggtgcaagccggcgagatgcaaggcaaaattgcagaacgaattacc
caatttaatttaggcgacgaacaatatttatctggctatccggtatccttttgggatgca
tttggtgaaaccggtatcccattgcgaaccaccattactgaaatgggccctttattgttg
tcacgcttgctcaatcttaacgcaacgcaagagggattgctaaatttggtgttccgtgtg
gcagatgatcgtggcttgctgttgattgatttaaaagatttgcgcgccatgttgaaattt
gtggcagaaaatgccaaaagttttcaattggaatatggtaatgtttccgctgccagcgtg
ggcgcgattcaacgtgcgttgttggcgttggaaaatgagggcgcggcaagtttatttggt
gagcctgctttaaatttggaagattggttgcaaactcgtgatggtcgcggcgtgatcaac
gtccttaacgcggaaaaattgattaattcgccgaaaatgtatagtgcttttttattgtgg
ttgatggcggaattatttgaaaacttaccagaggtaggcgatccggacaaaccgaaattt
gtgatgttctttgatgaagcacacttattatttgacgatgcgccacaggcgttgatagag
cgcgtggaaaaagtggtacgcttgattcgttcaaaaggcgttggagtctattttgtcacg
caaaatccgctggatttgccggatacggtgttggggcaattgggtaatcgggtgcaacac
gctttacgcgcatttacgccacgcgatcaaaaagcagttaaatcggcagcggaaaccttc
cgagccaatcctaatgtgaatgtggtggaaactatttctaccttgggggtaggacaggca
ttagtttcatttttagatgaaaaagggatgccgacgccggtggaagtggcttatatttat
ccgcctcgtagccagcttaagccattgacgacgcttgaacgtcaagattgggtgaaagcc
gatgatctttatgcttattatagtgcgtatatggataatgagtcggcgtttgaagtgctt
aaccagcaagcggatttagccgctgtggcgcaaaaacaagcagagcaggcgcaagcagaa
gaagaaaacggattgatgagcagcttgggccggatgttgtttgggcagaaaaaacgcggc
gagcaattgacggtgacagagcaggtggtgagcagtgtggcgaaatctgttggacgcaat
ttacgtaatcaaattaccaaacaaattatgcgtggcattttgggcgcgctgaaaaaataa
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