Pseudomonas aeruginosa PA38182: BN889_00122
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Entry
BN889_00122 CDS
T03031
Symbol
icmF1
Name
(GenBank) IcmF1
KO
K11891
type VI secretion system protein ImpL
Organism
paeu
Pseudomonas aeruginosa PA38182
Pathway
paeu02025
Biofilm formation - Pseudomonas aeruginosa
paeu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paeu00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BN889_00122 (icmF1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BN889_00122 (icmF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paeu02044
]
BN889_00122 (icmF1)
Secretion system [BR:
paeu02044
]
Type VI secretion system
Imp/Vas secretion system core components
BN889_00122 (icmF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
RHH_1
Motif
Other DBs
NCBI-ProteinID:
CDI88202
LinkDB
All DBs
Position
complement(115132..118662)
Genome browser
AA seq
1176 aa
AA seq
DB search
MKGFLNFFARWVVPVLGLLALSLIIWFLGPLLRLGNYEPLASATSRWVLIVLLFLVWIGF
RVLRIVQARRNAAKVMQSLAEVSAPDAASVATAEELATLKQRMDEALALLKRAKLGGSER
RNLYELPWYVIIGPPGSGKTTALMNSGLDFPLAAQMGAGAIRGVGGTRNCDWWFTDEAVL
LDTAGRYTTQDSHAQVDKAAWLGFLDLLKTQRKRRPIDGAFIAISLSDLLLGSDAERAAH
AQAIRARIQELYQQLGVRFPIYVMLTKFDLVPGFMEFFDSLNREERAQVWGMTFALDDGK
SAEGPLAVFDSEFALLEQRLTARLVERLQQERDPARRDLVYGFPQQFAALRECLGEFLNG
VFKPNPYEERPLLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIER
LFREVAFGERGLVGTNPKVERRRKWLTIGALSATALVVLAVTAVWIASYRANQSYIAAVD
QRVDPLARGIESLSPAQRDVLAVLPQLNAVQNLAGDAPSWAEGYGLYQGDMLGEESASVY
RKLLIAVFAPRLVTRIEEQLRSGGSSDFLYEGLKAYLMLGSPDHYDADFIKAWISLDWER
NLPRDLSPEQRQALHAHLDALLERRPPSARLDQDLVEDLRRQLQQLPVAQRVYDRVKRQR
LPKDMPDFRISDAAGRDAPLVFARKSGKPLTDPLSGFFTYRGYREVFLTASLSQAGTIAE
EQWVLGRDLNDAGDAANLALDVRRLYFQDYLRQWDDLLADLTVVPITNVTQAADVLRILS
GPTSPFRKLLEAVARETDLQKGDRLVAAQVKKAADGTVDKLKQRLGSLVGQEEEGAREQP
RQVDSDPISAHFAELNSLVSKGEGGNEPAPIDSLLEDMNALYVQVSAMAGASGDSLLGDA
KNQVAAAASRVALSAERQPPVVQGLVKNVVNSTTSSMMGSVRNQLNAAWISDVVSVYRQS
LAGRYPIAAGSSRDATLEDFGHFFGAGGVMDSYFRQYLQPYVDTSASTWRWQPGAAQKLG
INPGVLHTFQRAAAIRDAFFRSGGMQPAVRFELKPVTMDAAISQFILDLDGQQLTYDHGP
ARPVAMQWPSANGLGVVRLTVTPPPSSGRSGLTLEGPWAWFRLLDQSDLERGNSPDRFTL
RLRIDGSSIACELRASSAFNPFKSRVVSGFSLPERL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttcctcaacttcttcgcgcgctgggtggtgccggtgctcggcctgctcgcc
ctgagcctgatcatctggttcctcggcccgctgctgcgcctgggcaactacgaaccgttg
gcctcggcgaccagccgctgggtgctgatcgtcctgctgttcctggtctggatcggcttc
cgcgtgctgcgcatcgtgcaggcccggcgcaacgcggcgaaggtcatgcagagtctcgcc
gaggtcagcgcgccggacgccgccagcgtcgccaccgccgaagagctggcgaccctcaag
caacgcatggacgaggccctggccctgctcaagcgggccaagctgggcggcagcgagcgg
cgcaacctgtacgagttgccctggtacgtgatcatcggcccgcccggttcgggcaagacc
accgcgctgatgaattccggcctcgacttcccgctcgccgcacagatgggcgccggggcg
atccgcggggtcggcggcacgcgcaactgcgactggtggttcaccgacgaagcggtgctg
ctggacaccgccggccgctataccacccaggacagccacgcccaggtggacaaggccgcc
tggctgggcttcctcgacctgctcaagacccagcgcaagcgccgccccatcgatggcgcg
ttcatcgccatcagcctttccgacctgctgctgggcagcgacgccgagcgcgccgcccat
gcccaggcgatccgcgcacgcatccaggagctgtaccagcagctcggggtgcgcttcccg
atctacgtgatgctgaccaagttcgacctggtgccgggcttcatggagttcttcgacagc
ctgaaccgcgaggaacgcgcgcaggtctgggggatgaccttcgccctcgacgacggcaag
agcgcggaaggcccgctggcggtgttcgacagcgaattcgccctgctcgaacagcgtctc
accgcgcgcctggtggaacgcctgcagcaggagcgcgacccggcgcggcgcgacctggtc
tacggcttcccgcagcaattcgccgccctgcgcgaatgcctcggcgagttcctcaacggc
gtgttcaagcccaacccctacgaggaacgcccgctgttgcgcggcctgtacttcaccagc
ggaacccaggaaggcagtccgatcgaccgtctgatcggcagcatggcgcagtcgatgaac
ctcgaccgccagcacctggcgcggcagaccggaaccgggcgcagctacttcatcgagcgg
ctgttccgcgaagtggcgttcggcgaacgcggcctggtcggcaccaacccgaaggtcgag
cgccgccgcaagtggctgaccatcggcgcgctgagcgccaccgcgctggtggtgctggcg
gtgacggcggtatggatcgccagctaccgcgccaaccagagctacatcgccgcggtcgac
cagcgcgtcgacccgctggcgcgcggcatcgagtcgctgagcccggcccagcgcgacgtc
ctggccgtactgccacagctcaacgcggtgcagaatctcgccggcgacgcgccgagctgg
gccgaaggctacgggctgtaccagggcgacatgctcggcgaggagtccgccagcgtctac
cgcaagctgctgatcgcggtgttcgccccgcgcctggtgacccgcatcgaggaacagttg
cgctccggcggcagcagcgatttcctctacgagggcctgaaggcctacctgatgctcggc
agcccggaccattacgacgcagacttcatcaaggcctggatcagcctcgactgggaacgc
aacctgccgcgcgacctctcgccggaacagcgccaggcgctgcacgcgcacctcgacgcg
ttgctcgaacgacggccgccgtcggcgcgcctggaccaggacctggtcgaggacctgcgc
cgccagttgcagcaactgccggtggcgcagcgggtctacgaccgggtcaagcggcagagg
ctgcccaaggacatgcccgacttccgcatcagcgacgccgccggccgcgacgcgccgctg
gtgttcgcgcgcaagagcggcaagccgctcaccgacccgctcagcggcttcttcacctac
cgcggctatcgcgaggtgttcctcaccgccagcctcagccaggccggcaccatcgccgag
gaacagtgggtgctcgggcgcgacctgaacgatgccggcgacgccgccaacctggccctc
gacgtgcgtcgcctgtatttccaggactacctgcggcagtgggacgacctgctcgccgac
ctcaccgtggtgccgatcaccaatgtcacccaggccgccgacgtgctacgcattctctcc
ggaccgacctcgccgttccgcaagctgctcgaggcagtggcccgcgagaccgacctgcag
aagggcgaccggctggtcgccgcgcaagtgaagaaggccgccgacggcaccgtggacaag
ctcaagcagcgcctcggctcgctggtcggccaggaggaagagggcgcccgcgaacagccg
cggcaggtcgacagcgacccgatcagcgcccacttcgccgaactcaacagcctggtcagc
aagggcgagggcggcaacgagccggcgccgatcgacagcctgctggaggacatgaacgcg
ctctacgtacaggtcagcgccatggccggagccagcggcgactcgctgctcggcgacgcc
aagaaccaggtggccgccgccgcctcgcgcgtggctctcagcgccgagcgccagccgccg
gtggtccagggcctggtgaagaacgtggtcaactccaccaccagcagcatgatgggcagc
gtgcgcaaccagctcaacgcggcctggatcagcgacgtggtcagcgtctaccggcagtcc
ctggccgggcgctacccgatcgccgccggcagctcgcgcgacgccaccctggaagacttc
ggccacttcttcggtgccggtggggtgatggacagctacttccgccagtacctgcaaccc
tacgtcgacacctccgccagcacctggcgctggcagcccggcgcggcgcagaagctcggc
atcaaccccggcgtgctgcacaccttccagcgcgcggcggcgatccgcgacgccttcttc
cgctccggcggcatgcagccggcggtgcgcttcgaactcaagccggtgaccatggacgcg
gcgatcagccagttcatcctcgacctcgacggccagcagttgacctacgaccacggcccc
gcccgcccggtggcgatgcagtggccgagcgccaacggcctcggcgtggtccgcctgacg
gtgacgccgccgcccagcagcggccgttccggcctgaccctggaaggcccctgggcctgg
ttccgcctgctcgaccagtcggacctggaacgcggcaactcgccggaccgcttcaccctg
cggctgcgcatcgacggctccagcatcgcctgcgagctgcgcgccagcagcgccttcaac
cccttcaagagccgggtcgtgtccggcttcagcctcccggagcgcctttga
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