Pseudomonas aeruginosa PA38182: BN889_02585
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Entry
BN889_02585 CDS
T03031
Symbol
icmF3
Name
(GenBank) protein IcmF3
KO
K11891
type VI secretion system protein ImpL
Organism
paeu
Pseudomonas aeruginosa PA38182
Pathway
paeu02025
Biofilm formation - Pseudomonas aeruginosa
paeu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paeu00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BN889_02585 (icmF3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BN889_02585 (icmF3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paeu02044
]
BN889_02585 (icmF3)
Secretion system [BR:
paeu02044
]
Type VI secretion system
Imp/Vas secretion system core components
BN889_02585 (icmF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
HMG_box
Motif
Other DBs
NCBI-ProteinID:
CDI90643
LinkDB
All DBs
Position
complement(2679238..2683053)
Genome browser
AA seq
1271 aa
AA seq
DB search
MSGATLFMLVLLLVLLALLLGALGWWWRTRGGTEIRSFYAAVRQMEREQGWQGRYEAPWL
LMLGNETEGEQLCSTWRLLPVARPAWFGRWWSDGEGAILLVPESVFLPDEGLRRQSGAWL
RLLRLFLRLRGRRALDGVVWNIPLARLQDGEQAANLGLAARRRFVELTQRLGLSLPVYVV
IAGLEDLPGFQELLAALPEEARERALGWSSPFAAEAAWQSRWCEQALEEITATLTESIVE
LGTLRGQVDNELYCLPPRLESLRGSLQALLEPVFQGNARGEAPRFRGLYLSGSEAAGAAA
DEVLPAVDAPRRRSSFASQLWARRILAEEGLAQAVPRILQLRQRWQRGIGLAALCLCLLW
GGLMTWVWRDALRDAGELSQLLHGASERYQPLDDDTRRAAQVRQNVQAWWQLVSQAPRWR
FTSLAFPSSWFSSLDARIDNAYRRVSERLLVRPLRSLLEGEASDLRAIRSDGQPGLKEGD
DPSQWKDYLAAKDLVARATTLERHNRLFAQAIDNRRTPLDDLLQLSNDALGSSYNAGSLA
RLAYYNRTLFAERPADLAALDLGRVAATAADNFHDLMARWLNAYFLTDSLERTGNALTQE
LAQLGQERDATAAQLLGIGELINHLQQQVNRINLIWGNGVGQDLVPGYQNLLKSAQQSSL
LGNRVEELQNLTVQLQQQFRSEWIAPPEAAGDGLLVKQGATLKLADDLLGLKRAIDDLKT
KDFVSVALADKTLADHSLLSIDDIGVTQALSFFNDFTGYYESTLPSLNPRYRYSVLHAAA
SAATEAMWQSLGPRSRSLASRNASRFDVQVKQVQVLQAALLELQDLQAGARLLLSLNALA
VADIGQALRDIDEQAVLREPVDFSRWSGAPNFGLQMFRAQDSAELKQSLNSQFNAMAAVA
ERHAPALEWLQAQQSSLATADYNAFVRFSALNAELQKFKADNPASTAAQLAKLVGNDFNQ
MDIGSCADILNGVLLPSSRSDLATRLVDLRQGALGRCQSLQQQQAAQAWKDLADYFNQYL
AGRFPFAYSLEAADAEPGRVRHLLQLMETRLPQVREGLAQVRSPDLPAAEDFVRRLEQAQ
RWLGPLFERDKSGLLGVALDIDWRSDRSLERGADQVIAWSLYSGDQESRFPGAQDKGLTW
NVGDPLKIMLRWAKNGSQRPADDPRQASLAVADLEAGWSYQGSWALLRMMRAHFSRQRPP
NVDYTEFPLVLQLPVYAPYSPENEARMFLRLSLMSLGGKTPLSIQPLPVRAPQSPFATLL
PATVASTGGTP
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcgacactgttcatgctggttctcctcctggtgctgctggcgctgctgctg
ggggcgctgggctggtggtggcgaacccgcggtggtacggagatccgcagcttctacgca
gcggtccggcagatggagcgcgagcagggctggcagggccgctacgaagcgccgtggctg
ctgatgctcggcaacgagaccgagggcgagcagttgtgctccacctggcgtctgctgccg
gtggcgcgcccggcctggttcggccgctggtggtcggacggcgagggggcgatcctgctg
gtgcccgagtcggtgttcctgcccgacgagggcctgcgccggcaaagcggcgcctggctg
cgcctgttgcgtctgttcctgcgcctgcgtggcaggcgcgcgctggacggagtggtctgg
aacattccgctggcgcggctgcaggatggcgagcaggcggccaacctcggcctcgccgcg
cgccgtcgtttcgtggaactgacccagcgccttggcctgagcctgccggtttacgtggtg
atcgctggcttggaagacctgcctggcttccaggaacttctcgcggcgctgcccgaggag
gcgcgcgagcgcgccctcggctggtcctcgccgttcgccgccgaagcggcctggcagtcg
cgctggtgcgagcaggcgctggaggaaatcaccgccaccctgaccgagtcgatcgtcgaa
ctcggtaccttgcgcggccaggtggacaatgagctgtattgcctgccgccacgcctggaa
agcctccgcggttcgttgcaggcgctgctcgaaccggtcttccagggcaacgccaggggc
gaggcgccgcgctttcgcggtctctacctgagcggcagcgaggcggcgggcgcggcagcc
gacgaagtcctgccggcggtcgacgcgccgcgtcggcgcagcagcttcgccagccaactg
tgggcacggcggatccttgccgaggaaggcctggcccaggcggtgccgcgcatcctccag
ctgcgtcagcgctggcagcgcgggatcggcctcgccgcgttgtgcctgtgcctgctctgg
ggcggcctgatgacctgggtctggcgcgacgcgctgcgcgacgccggtgaactgtcgcaa
ctgctgcatggcgccagtgagcgctaccagccgctcgacgacgacactcggcgcgccgcc
caggtccggcagaacgtccaggcctggtggcaactggtgtcacaggcgccgcgctggcgc
ttcacttcgctggcgtttcccagttcctggttttcctccctggatgcacgtatcgacaac
gcgtatcgccgcgtttccgagcgcctgctggtgcgaccgctgcgcagcctgctggaaggc
gaggcgagcgacctgcgggcgatccgcagcgatggccaacccggcctgaaggagggcgac
gaccccagccagtggaaggactacctggcggcgaaggacctggtcgcccgcgccactacg
ctggagcgccacaatcgcttgttcgcccaggccatcgacaaccgcaggacgccgctcgac
gaccttctgcaactgagtaacgatgccttgggcagcagctacaacgccggcagcctggcg
cgcctggcctattacaaccgcacgctgttcgccgagcgtccggccgatctcgccgccctc
gacctgggccgggtcgccgccacggcggcggataacttccatgacctgatggcacgctgg
ctgaacgcctacttcctcaccgacagcctggaacgcaccggcaatgccctgacccaggaa
ctcgcgcagctcggccaggaacgagacgccacggcggcccagttgctggggatcggcgaa
ttgatcaaccacctgcagcaacaggtcaaccgcatcaacctgatctggggcaatggcgtc
ggccaggatctcgtccctggctaccagaacctgctcaagagcgcccagcaaagcagcttg
ctgggaaaccgcgtggaggaactgcagaacctcaccgtgcagttgcagcagcagtttcgc
agcgaatggatcgcgcctccggaggctgccggcgacggcctgctggtgaaacagggggcg
acgctcaagctggccgatgacctgctcggtctgaaacgcgccatcgatgacctgaagacc
aaggacttcgtctccgtggccctggcggacaagacactggcggaccactccttgctgagc
atcgacgatatcggcgtgactcaggcgttgagcttcttcaacgacttcaccggctactac
gagagcaccctgccatcgctcaacccgcgctatcgctattcggtcctgcacgccgccgcc
agcgcggcgaccgaggccatgtggcaaagcctcgggccgcgcagtcgtagcctggccagt
cgcaatgcctcgcgtttcgacgtgcaggtcaagcaggtccaggtgttacaggcggcgctg
ctggagttgcaggacctgcaggccggcgcgcgcctgctgctcagcctcaacgcgctggcc
gtggccgatatcggccaggccctgcgcgacatcgacgagcaggcggtgctgcgcgagccg
gtcgatttcagccgctggtcgggcgcgccgaatttcggcctgcagatgttccgcgcccag
gacagtgccgagctgaagcaaagcctgaacagccagttcaatgccatggcggccgtcgcc
gaacgccacgccccggcgctggagtggttgcaggcgcagcaatccagcctggccaccgcc
gactacaacgcgttcgtgcgcttcagcgcgctcaacgccgaactgcagaaattcaaggcc
gacaacccggcgagcaccgcggcgcagttggcgaagctggtgggtaacgatttcaaccag
atggacatcggcagttgcgccgacattctcaacggcgtgctcctgccgtccagccgcagc
gacctggcgacgcgcctggtggacctgcgccagggcgcgctcgggcgctgccagtcgttg
caacagcagcaggcggcgcaggcctggaaggacctcgccgactacttcaaccagtacctc
gccggacgcttcccgttcgcctacagcctggaagcggccgatgccgagccggggcgggtg
cggcacctgctgcaactgatggagacgcgcttgccgcaggtgcgcgaagggctggcccag
gttcgctcgccggacctgccggccgccgaggacttcgtccgccgcctggagcaggcgcag
cgctggctcggcccgctgttcgagcgcgacaagtcgggcctgctcggcgtcgccctggac
atcgactggcgcagcgaccgcagcctggaacgcggcgccgaccaggtgatcgcctggagc
ctgtactcgggcgaccaggaaagccgtttccccggcgcgcaggacaagggcctgacctgg
aatgtcggcgatccgctgaaaatcatgctgcgctgggcgaagaacggctcgcagcgtccg
gcagacgacccgcgccaggccagcctggcggtggccgacctcgaggccggctggagctac
cagggctcctgggcgctgttgcgcatgatgcgcgcgcacttctcccggcagcgcccgccg
aacgtcgactacacggagtttccgctggtcctgcaactgccggtgtatgcgccctacagc
ccggaaaacgaggcgcggatgttcctccgcctgtcgttgatgagcctgggcggcaagacc
ccgctgtccatccagccgctgccggtgcgcgcgccgcaatcgccgttcgcgacgctgttg
ccggccaccgtcgccagcaccggaggtaccccatga
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