Pseudomonas aeruginosa PA38182: BN889_04119
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Entry
BN889_04119 CDS
T03031
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paeu
Pseudomonas aeruginosa PA38182
Pathway
paeu03410
Base excision repair
paeu03430
Mismatch repair
paeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN889_04119 (recJ)
03430 Mismatch repair
BN889_04119 (recJ)
03440 Homologous recombination
BN889_04119 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeu03400
]
BN889_04119 (recJ)
DNA repair and recombination proteins [BR:
paeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BN889_04119 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN889_04119 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN889_04119 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CDI92152
LinkDB
All DBs
Position
complement(4304097..4305812)
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AA seq
571 aa
AA seq
DB search
MRIEPRPLPETLPDLGDLPPLLARLYAARGVRCAEELDKGLARLIPYQRLKGIEEGVALL
VDALEGGQRILIVGDFDADGATASSVGVLALRMLGAAWVDYLVPNRFEYGYGLTPEIVGV
ALEKRPDLLVTVDNGISSVDGVQAAKAAGLKVLVTDHHLPGPELPEADAIINPNQPGCEF
PSKAMAGVGVIFYVMLALRARLRELDWFARRGLKEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRALLEVAGRPPVRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCDDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKELSLEQLPFGLCLFDADWH
QGVIGILASRLKERYHRPTIAFADAGDGSLKGSARSIPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQENFGAFSAAFDAEVRRQLAEEDLAGRLLSDGQLSIQEFHLELARALR
QAGPWGQHFPEPMFHGVFQLVQQRIVGERHLKLVLKSECGSLQLDGIAFNIDREQWPNPT
VRWAELAYKLDVNEFRGQESVQLMIVHMAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgccccctgcccgaaaccctgcccgatctcggcgaccttccgcca
ttgctggcgcgcctgtacgcggctcgtggcgtgcgttgcgccgaggagctggacaagggc
ctggcgcggctgattccctaccagcggctgaaaggcatcgaggagggcgtggcgctgctg
gtggacgccctggagggcggccagcggattctcatcgtcggcgacttcgacgccgacggc
gccaccgccagcagcgtcggcgtgctggccctgcgcatgctcggcgcggcctgggtcgat
tacctggtgccgaaccgcttcgagtacggctacggcctgaccccggagatcgtcggcgtg
gccctggagaagcgtcccgacctgctggtgacggtggacaacggcatctccagcgtggac
ggcgtccaggcggcgaaagccgcggggctcaaggtgctggtcaccgaccaccatctgcct
ggcccggaactgccggaggcggatgcgatcatcaaccccaaccagccgggctgcgaattc
cccagcaaggccatggccggggtcggggtgatcttctatgtgatgctggcgttgcgggcg
cgcctgcgcgagctggactggttcgcccggcgcgggctgaaggaaccgaacctcgccgag
ctgctcgacctggtggcgctgggcagcgtcgccgatgtggtgccgctcgatgccaacaac
cgcatcctggtccaccagggcctcgcgcgcatccgcgccggccgcgcccggccgggcttg
cgcgcgctgctggaggtggccgggcggcctccggtacggatcacctccaccgacctgggt
tttatcctcggtccgcgcctgaacgcggcgggtcggctcgacgacatgtccctcggcatc
gaatgcctgctctgcgacgacgaagcgctggcccgcgacatggcggtgcagctcgaccag
ttgaaccaggaccgcaaggccatcgagcagggtatgcagcgcgaggcgctggcgcagctc
aaggagctgagcctggagcaactgccgttcggcttgtgcctgttcgacgccgactggcac
cagggcgtgatcggaatcctcgcctcgcgcctgaaggagcgttaccaccggccgaccatc
gccttcgccgatgccggcgacggcagcctgaaaggctcggcacggtcgattcccggcttc
cacatccgcgacgcgctggacgcggtagccgcccgtcatcccgggctgatcagcaagttc
ggcggccacgcgatggctgccggactatcgttgccgcaggaaaacttcggcgctttctcc
gccgccttcgatgccgaagtacgccgccaactggccgaggaggacctggccgggcgcctg
ctctccgatggccagttgagcatccaggagttccacctggagttggcgcgcgcgttgcgc
caggccggtccctggggccagcactttcccgagccgatgttccacggggtgttccagctg
gtgcagcagcggatcgtcggcgagcgtcacctgaagctggtgctgaaaagcgaatgcggc
tcgctgcaactggatggcattgccttcaacatcgaccgcgagcagtggcccaaccccacc
gtgcgctgggccgaactggcctacaaactcgacgtcaacgaattccgcggccaggaaagc
gtgcagttgatgatcgtccacatggctcctcgctga
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