Pseudomonas aeruginosa PAO1-VE13: N297_1334
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Entry
N297_1334 CDS
T03097
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paev03016
]
N297_1334 (rnd)
Enzymes [BR:
paev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
N297_1334 (rnd)
Transfer RNA biogenesis [BR:
paev03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N297_1334 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
AGY73503
LinkDB
All DBs
Position
1405338..1406462
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AA seq
374 aa
AA seq
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MTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDP
LLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMG
YSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEEKRAW
LLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRNHV
LRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAQAARLPQSEWPEALPEP
LPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKVLEALLKSGYPDGPYELPDSLRGWRR
ERMGQALLDALESA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcccgaaatccagtggatccgcgatgatgccagcctggcgcagcaatgccgg
gaatggcgcacacagccgtacctcgcgctcgataccgagttcatgcgcgtcgataccttc
tatcccgcggccggtctggtgcaggtgggcgatggccggcaggagtggctgatcgatccg
ctgctgatccaggactggagccccttcgccgagctgctcgaagacgagcgggtggtgaag
gtgctgcatgcctgcagcgaagacctcgaggtgttcctgcgcctcaccggcagcctgccg
gtgccgctgttcgatacgcagttggccgccgcttatctcggcatggcccattcgatgggc
tactcgaagctggtgaaggaggtgctggacatcgacctgcccaaggacgagacccgttcc
gactggttgcaacggccgctcaccgagatgcagatgcgctacgccgccgacgacgtccag
cacctcgcccaggtctacctggccctggatacgcggctgagcgaggagaaacgcgcctgg
ctgctggaggacggcgccgaactggtcgccaacctctgccgcgagagcgatccgcgcgag
gcctaccgcgaggtcaagctgggttggcggctgcgtccgcagcaactggcggtgctccgc
gaactctgcgcctggcgcgaggagcaggcacgcctgcgcaaccggccgcgcaaccacgtg
ctgcgcgaacgcaccctgtggccgctggcgcgcctgctgccgaagaacaagaccgacctg
gcggcgatcgaggacatgcatccgcgcaccgtgcgccaggacggcgacttcctcatcgaa
ctgatcgcccaggctgcgcgcctgccgcagagcgaatggcccgaggcgctgcccgagccg
ctgccgccggaggtcaccccgctgctcaagagcctgcgcgccatcggccagcgcgaagcg
gagaccctgggcatggcgcccgaactgatgctgcgcaagaaagtcctcgaggcactgctc
aagagcggctatcccgacggtccctacgaactgcccgattccctccgtggctggcgccgc
gaacgcatgggccaggccctgctggacgccctggagagcgcatga
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