Pseudomonas aeruginosa PAO1-VE13: N297_2517
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Entry
N297_2517 CDS
T03097
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Pathway
paev00260
Glycine, serine and threonine metabolism
paev00460
Cyanoamino acid metabolism
paev00630
Glyoxylate and dicarboxylate metabolism
paev00670
One carbon pool by folate
paev00680
Methane metabolism
paev01100
Metabolic pathways
paev01110
Biosynthesis of secondary metabolites
paev01120
Microbial metabolism in diverse environments
paev01200
Carbon metabolism
paev01230
Biosynthesis of amino acids
paev01240
Biosynthesis of cofactors
paev04981
Folate transport and metabolism
Module
paev_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N297_2517
09102 Energy metabolism
00680 Methane metabolism
N297_2517
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N297_2517
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N297_2517
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N297_2517
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N297_2517
Enzymes [BR:
paev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N297_2517
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGY69106
LinkDB
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Position
complement(2742396..2743652)
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AA seq
418 aa
AA seq
DB search
MFSKHDQLQGYDDELLAAMDAEDRRQEDHIELIASENYASKRVMQAQGGGLTNKYAEGYP
GKRYYGGCEHVDKVERLAIDRARQLFGADYANVQPHSGSSANAAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGLDTATGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LARANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIRNAKAMAE
VFIGRGYDVVSGGTDNHLMLISLVKQGLTGKAADAALGAAHITVNKNAVPNDPQSPFVTS
GIRIGTPAVTTRGFREGECRELAGWICDILDDIDNPEVGERVRGQVGEFCRHFPVYAD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccagctccagggctacgacgacgaactgctcgccgcgatggac
gccgaagaccggcggcaggaagaccacatcgaactgatcgcctcggagaactacgccagc
aagcgggtcatgcaggcgcagggcggcggcctgaccaacaagtatgccgagggctatccg
ggcaagcgttactacggcggctgcgaacacgtcgacaaggtcgagcggctggccatcgac
cgcgccaggcaactgttcggcgccgactacgccaacgtccagccgcactccggttcctcg
gccaacgctgcggtgtacctggcgctgctcaacgccggcgacaccatcctcggcatgagc
ctggcccacggcggccatctcacccacggcgccaaggtgtcctcctccggcaagctgtac
aacgccgtgcagtacggcctggacaccgctaccgggctgatcgactacgacgaagtcgag
cgcctggccgtggagcataagccgaagatgatcgtcgccggcttctccgcctactccaag
accctcgacttcccgcgcttccgcgccatcgccgacaaggtcggcgcgctgctgttcgtc
gacatggcccacgtcgccgggctggtcgccgccggcctctacccgaacccgatccccttc
gccgacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatc
ctggcgcgcgccaacgaggagatcgagaagaagctcaactccgcggtattccccggcgcc
cagggcggcccgctgatgcacgtgatcgcggccaaggcggtgtgcttcaaggaagcgctg
gagccgggcttcaaggactaccaggcgcaggtgatccgcaacgccaaggcgatggccgag
gtgttcatcgggcgcggctacgacgtggtttccggtggcaccgacaaccacctgatgctg
atcagcctggtgaagcaggggctgaccggcaaggccgccgacgcggcgctcggagcggcg
cacatcacggtgaacaagaacgccgtgccgaacgatccgcagagcccgttcgtcacctcc
ggcatccgcatcggcaccccagcggtgaccactcgcggtttccgcgagggcgagtgccga
gaactggctggctggatctgcgacatcctcgacgatatcgacaatcccgaggtcggcgaa
cgggtcaggggccaggtcggcgaattctgccggcacttcccggtctacgctgattga
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