Pseudomonas aeruginosa PAO1-VE13: N297_2539
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Entry
N297_2539 CDS
T03097
Name
(GenBank) putative RNA polymerase sigma factor fecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Pathway
paev02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N297_2539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paev03021
]
N297_2539
Transcription machinery [BR:
paev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N297_2539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_11
HTH_29
HTH_31
GerE
HTH_Tnp_ISL3
HTH_36
DUF6362
HTH_3
DUF8612
DUF134
Xre-like-HTH
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AGY69579
LinkDB
All DBs
Position
complement(2786360..2786878)
Genome browser
AA seq
172 aa
AA seq
DB search
MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIG
MPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAPSPEARELVLELLEEISRMLD
GLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgatccttctcagcgcccaccatcgcgccatgcatgcgctgtacagcgag
caccatggctggttgcagaactggctgcgcggcaagctgggctgcgcggcggacgcggcg
gacctggcccaggacaccttcctgcgcatcctgctcaagcgcgaactgcgcgagatcggc
atgccgcgcgcgttcctgcggaccatcgcccgcggcctggtgatcgaccactggcgtcgc
gaggaactgcagcgcgcctacctcgaaagcatcgcccacctgcccgaggcacaggcgccg
tcgcccgaggcgcgggaactggtgctggaactgctggaggaaatctcgcggatgctcgac
gggctcaagccgaaggtccgcaccgccttcctcctggcccagtgcgaagacctcagccac
cggcagatcgccgaacgcatgggggtttcccagcgtagcgtcgagcgctacgtggccgag
gcgctgtaccactgctacctgctgcgctacggcgaatga
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