Pseudomonas aeruginosa PAO1-VE13: N297_3024
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Entry
N297_3024 CDS
T03097
Name
(GenBank) bacterial regulatory helix-turn-helix, lysR family protein
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paev03000
]
N297_3024
Transcription factors [BR:
paev03000
]
Prokaryotic type
Helix-turn-helix
LysR family
N297_3024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
HTH_23
HTH_29
Cro
MarR_2
HTH_28
HTH_24
MarR
HVO_A0261_N
P22_Cro
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AGY71700
LinkDB
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Position
complement(3276314..3277303)
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AA seq
329 aa
AA seq
DB search
MMTTFRCHLGKPVKLHQLQALVASADAGGIRAAARALGISQAAVTRALRELETEQHLPLF
VRTPSGLTFTEYGKALLIHARLVLKQLEHAQVELDHLRGQASGRLCIGVTPWVALTFLSE
AVQAFRERMPEVRLELFESLMAVAQPLLRDGSMDFAIGPLHGAQAAQEFACEKLLDYDTA
VLVRQGHPLAGCGSIHELLEQDWALNYTGDGHDALMRELFWRHGALIDERRIVRAHSVAI
LQTLVEQADMCTWVPAIIGAAPPLLGRVVPLALRETFEPRRLGIITRRGGALSNPAQCFV
ECLLQAIRRHARSAKKDDRRLFETLRLLV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaacctttcgttgtcacctcggtaagcccgtgaaactccaccagttgcaagcc
ctggtcgccagtgccgacgccggcggcatccgcgccgccgcccgcgccctggggatttcc
caggcggccgtgacccgcgcgctgcgcgaactggaaaccgaacagcatctgccgctgttc
gtccgcacgcccagcggcctgaccttcaccgaatacggcaaggcgctgctgatccacgcc
cggctggtgctcaagcaactggagcacgcgcaggtcgaactcgaccacctgcgtggccag
gccagcggccggctgtgcatcggggtgacgccttgggtggcgctgaccttcctctcggag
gcggtgcaggcgttccgcgagcgcatgccggaggtgcgcctggagcttttcgaaagcctg
atggcggtggcccagccattgcttcgcgacggcagcatggatttcgccatcggcccgctg
cacggcgcccaggcggcccaggaattcgcctgcgagaagctgctcgactacgacaccgcg
gtgctggtccgccaggggcatccgctggcgggttgcggctcgatccacgagctgctggaa
caggactgggcgttgaactacaccggcgacggccacgacgccctgatgcgcgagctgttc
tggcgccacggtgccttgatcgacgagcggcgcatcgtccgcgcgcactccgtggcgatc
ctgcagaccctggtggagcaggccgacatgtgcacctgggtgccggcgatcatcggcgcc
gccccgccgttgctcggccgggtggtgccgctggcgctgcgggaaaccttcgagccacga
cggctgggcatcatcacccggcgcggcggagccctcagcaatccggcgcaatgtttcgtc
gagtgcctgctgcaggcgatccgccgccacgcccgctcggcgaagaaggatgaccggcgc
ctgttcgaaaccctgcgcctgctagtctga
DBGET
integrated database retrieval system
