Pseudomonas aeruginosa PAO1-VE13: N297_3764
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Entry
N297_3764 CDS
T03097
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Pathway
paev03030
DNA replication
paev03430
Mismatch repair
paev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N297_3764 (dnaE)
03430 Mismatch repair
N297_3764 (dnaE)
03440 Homologous recombination
N297_3764 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paev03032
]
N297_3764 (dnaE)
03400 DNA repair and recombination proteins [BR:
paev03400
]
N297_3764 (dnaE)
Enzymes [BR:
paev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N297_3764 (dnaE)
DNA replication proteins [BR:
paev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N297_3764 (dnaE)
DNA repair and recombination proteins [BR:
paev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N297_3764 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AGY69993
LinkDB
All DBs
Position
complement(4075152..4078673)
Genome browser
AA seq
1173 aa
AA seq
DB search
MTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQSNMCSLVKFYKTAMGAG
IKPICGADIWLASREEDGPLSRLSLLAMNAKGYRNLTELISRGWSEGQRNGEIIIERDWV
KEAAEGLIALSAAKEGEIGHALLDGEEAKAEALLREWMEVFPERFYVEVQRTSRVNDEEH
LHAAVALASRCNAPLVATNDVRFIKQEDFEAHETRVCIGEGRTLDDPRRPRTYSDQQYLK
SPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EERLEVLLPKDTPDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDYVA
DAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLDKAYEQEE
MLRDFLKSDEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKGLEPVNIDFIPLDDKPTYSL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
ELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCKNNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHFP
APFMAAVLTADMQNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDDDGRIVYGLGAIK
GVGEGPVEAITECRAEGGPFNTLFDFCDRVDLKRINKRTLEALIRAGALDRLGPHYHDEL
KAYQATVDLNRAVLLAAMEEAIQAAEQTARSHDSGHMDLFGGVFAEPEADVYANHRKVKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNLRVM
KNKKGDKMGFVTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEVSQDDFSGGLRLR
AKRVMSLEEARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPITLDYTSADAKAL
LQFGESWRVDPADDLIQALRDQFGRDNVFLNYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatccttcgttcacctgcgtctgcataccgaattctccctggtcgacggcctg
gtccgggtcaagcccctggccaaggcagtggcagggctgggcatgccggcggtggcggtc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggggccgacatctggctcgccagccgcgaggaagatggcccgctc
agtcgcctgagcctgctggcgatgaacgcgaagggttatcgcaacctcaccgagctgatt
tcccgcggttggagcgaaggccagcgcaacggcgagatcatcatcgaacgcgactgggtc
aaggaggcggcggaaggcctgatcgcgctgtccgcggccaaggagggcgagatcggccac
gcgctgctcgacggcgaggaagccaaggccgaggcgctgttgcgcgagtggatggaggtg
ttccccgagcgcttctacgtcgaagtgcaacgtaccagccgggtcaacgacgaggagcac
ctccacgcggcggtggctttggcgtcacgctgcaacgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggaagacttcgaggcccacgagacccgcgtctgcatcggcgag
ggtcggaccctcgacgatccgcggcggccgcgtacctattcggaccagcaatacctgaag
tcgccggcggaaatggccgagctgttcagcgacctgccggaagcgttggaaaacaccgtc
gagatcgccaaacgctgcaacatcgaggtgcagctgggcaagtacttcctgccggacttc
cccacgcccaatggcatgggcatcgacgactacctgcggcacgcctccttcgaaggtctc
gaggagcgcctggaggtgctgttgccgaaggacaccccggactacgaggccaagcgccag
gtctatgtcgatcgcctgaacttcgaactcgatatcatcatccagatgggtttccccggt
tacttcctcatcgtgatggacttcatcaagtgggcgaagaacaacggcgtaccggtaggc
cccgggcggggctcgggcgccggctcgctggtggcctacgtgctgaagatcaccgacctc
gatccgctggcctatgacctgctgttcgaacgtttcctcaacccggaacggatctccatg
cccgacttcgacgtcgacttctgcatggagggccgcgaccgggtgatcgactacgtggcc
gacgcctacgggcgcaacgcggtgagccagatcatcaccttcggcaccatggcggcgaag
gcggtggtacgcgacgtggcgcgggtccagggcaagtcctacggtctcgccgaccggctg
tcgaagatgatcccgttcgaagtcggcatgaccctggataaggcctacgagcaggaagaa
atgctccgcgacttcctcaagagcgacgaggaagccgccgagatctgggagatggccctc
aagctggaaggcatcacccgcggtaccggcaagcacgccggtggcgtggtgatcgcgccg
accaagctgaccgacttctcgccgatcgcctgcgacgaggaaggcggcggcctggtgacc
cagttcgacaaggacgacgtggaggcggccggcctggtgaagttcgacttcctcggcctg
cggaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgagcaggccaagaag
ggcctggagccggtgaacatcgacttcatcccgctggacgacaagccgacctattcgctg
ctgcagaaggccgagaccactgcggtgttccagctcgaatcgcgcggcatgaaggagctg
atcaagaagctcaagccggactgcctggaagacctcatcgcactggtggcgctgttccgc
ccgggtcctctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggtcgcgcc
gagctgtcctatccgcaccccgattaccagtacgccggcctggagccggtgctcaagccc
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtcatggccggc
tataccctcggtggcgcggacatgctgcgccgggcgatgggcaagaagaagcccgaggaa
atggccaagcagcgcggcggtttcatcgagggttgcaagaacaacggcatcgatgccgac
ctcgcgggcaacatcttcgacctggtggaaaaattcgccggctacggcttcaacaagtcg
cactcggcagcctacggcctggtctcctaccagaccgcctggctgaagacccacttcccg
gcgccgttcatggccgcggtactcaccgcggatatgcagaacaccgacaaggtggtgacg
ctgatcgaagaatgccggcacatgaagctgcgcatcgtggcgccggacgtgaacaactcc
gagttccgcttcaccgtcgacgacgatggccggatcgtctatggcctgggcgcgatcaag
ggcgtcggcgaggggccggtggaggcgatcaccgaatgccgcgccgaaggcgggccgttc
aacaccctgttcgacttctgcgaccgcgtcgacctgaaacgcatcaacaagcgcaccctg
gaagcgctgatccgcgccggtgcgctggatcgcctggggccgcactaccacgacgagcta
aaggcctaccaggctaccgtcgacctcaaccgcgccgtgctgctggcggcgatggaggaa
gcgatccaggccgccgagcagaccgcgcgcagccacgacagcgggcacatggacctgttc
ggcggagtcttcgccgagccggaggcggatgtctacgccaaccaccgcaaggtcaaggag
ctgaccctcaaggaacgcctgaagggcgagaaggacaccctcggcctgtacctgaccggc
catccgatcgacgagtacgaaggcgaggtgcggcgcttcgcccgccagcgcatcgtcgag
ctgaagccggcgcgcgatacccagacggtggccgggctgatcgtcaacctgcgggtgatg
aagaacaagaagggcgacaagatgggcttcgtcaccctcgacgaccgctccggacggatc
gaggcctcgctgttctccgaagccttcgccgcggcccagtcgctgctgcagaccgacgcg
ctggtggtggtcgagggcgaggtcagccaggacgacttctccggcggactgcgcctgcgc
gccaagcgcgtgatgagcctggaggaggcgcgtaccggcctggcggagagcctgcggatg
aagctgcacgccgacctgttgaagggcgatcgcctgcgctggctgggcgagctgttcaac
cgccatcgcggttcctgcccgatcaccctggactacaccagcgccgacgccaaggccctg
ctgcagttcggcgagagctggcgggtggatccggcggacgatctgatccaggcattgcgt
gaccagttcgggcgcgacaacgtcttcctcaattatcgttaa
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